Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 853 a.a., DNA ligase D from Brevundimonas sp. GW460-12-10-14-LB2

 Score =  164 bits (415), Expect = 8e-45
 Identities = 116/336 (34%), Positives = 165/336 (49%), Gaps = 23/336 (6%)

Query: 17  SKPARPRDPAQPNLPFDPMAERIEPC-----LALLKPVPPKGPDWVFEVKWDGYRLAIHI 71
           SKP   + PA+P         R  P      L  +   PP G  W  E+K+DGYR+ I +
Sbjct: 201 SKPTGRKGPAKPKPSKAAAKARKPPAFVPIQLCKVTDHPPGGTGWAHEIKFDGYRIQIGV 260

Query: 72  EPKGVRIITRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVVLDEEGRSDFGALQRSLGG 131
                 + TR G DW+ +F  +A  T       A++DGE   LDEE   DFGALQ ++  
Sbjct: 261 GGGRAVLRTRKGLDWSDKFSDLA--THAATWPDAVIDGELCALDEEHMPDFGALQAAISD 318

Query: 132 RGGKRSSTESVFFAFDLLYFDGHDLSGTELSVRRHLLEGFLDG---PTGAIQSSEEVFGD 188
                 + + V+FAFDLL+    DL    LS R+  L+ ++D      GA     E F  
Sbjct: 319 E----KTEDLVYFAFDLLFEGAEDLRKLPLSHRKARLQAYVDRIGKMAGARLRYVEHFAS 374

Query: 189 G--ALLEKACSMGLKGIIAKHRDWPYRSGRTGDWLKIKCLQSESFMIVGYEQSLTARGGL 246
              A+LE AC M L+G+++K  D PY +GR+  WLK KC   +  +I G+      R   
Sbjct: 375 TGQAVLESACRMDLEGVMSKKLDAPYHAGRSSTWLKSKCRGRDEVVIGGWSSEGGTR--F 432

Query: 247 GSLLLAGRKGHDWIYVGSVGTGFNTKDAEYLRKTLDRLKTSK-----PAVPLKGKNLVFA 301
            SLL+  R+     Y+G VGTG+     + L   L  +   K        P   K++ + 
Sbjct: 433 RSLLVGVREKGGLRYLGRVGTGYGEAVTKTLVPALKGVAAQKSPFAGAGAPKAAKDIHWV 492

Query: 302 QPTLIAEIEFRGWTHDGSLRHASYKGLREVQDNAAV 337
           +P L+AE+E  G+T  GSLR A++KGLRE +  A V
Sbjct: 493 KPVLVAEVEHGGYTESGSLRQAAFKGLREDKTAAEV 528