Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 884 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score =  211 bits (538), Expect = 4e-59
 Identities = 132/327 (40%), Positives = 181/327 (55%), Gaps = 23/327 (7%)

Query: 12  DSVAKSKPARPRDPAQPNLPFDPMAERIEPCLALLKPVPPKGPDWVFEVKWDGYRLAIHI 71
           D+ AK KPA  + PA+  +P     E I P L      PP    W+ E+K+DGYR+   I
Sbjct: 231 DTKAKRKPALKK-PAKSTMP-----EFIPPQLCETLDRPPSAKGWIHEIKFDGYRIQTRI 284

Query: 72  EPKGVRIITRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVVLDEEGRSDFGALQRSLGG 131
           E   V + TR G DWT ++PAI  ATS   +  AI+DGE   LDE G  DF ALQ +L  
Sbjct: 285 ENGEVTLKTRKGLDWTAKYPAI--ATSAANLPDAIIDGEICALDENGAPDFAALQAAL-- 340

Query: 132 RGGKRSSTESVFFAFDLLYFDGHDLSGTELSVRRHLLEGFLD--GPTGAIQSSEEV-FGD 188
              +  + E V+FAFDLL+ +  DL    L+ R+  L+  LD  G    ++  E    G 
Sbjct: 341 --SEGKTDELVYFAFDLLFEENEDLRQLPLTERKERLQTLLDDAGEDPRLRFVEHFETGG 398

Query: 189 GALLEKACSMGLKGIIAKHRDWPYRSGRTGDWLKIKCLQSESFMIVGYEQSLTARGGLGS 248
            A+L+ AC + L+GI++K  D PY+SGRT  W K KC      +I  Y ++    G   S
Sbjct: 399 DAVLKSACKLSLEGIVSKQADAPYQSGRTETWAKSKCRAGHEVVIGAYAKT---NGKFRS 455

Query: 249 LLLAGRKGHDWIYVGSVGTGFNTKDAEYLRKTLDRLKTSKP-----AVPLKGKNLVFAQP 303
           LL+   KG  ++YVG VGTG+  K  + +   L  L+TSK        P K  N+V+ +P
Sbjct: 456 LLVGVFKGDHFVYVGRVGTGYGAKTVDTILPRLRELETSKSPFTGIGAPKKDPNVVWVKP 515

Query: 304 TLIAEIEFRGWTHDGSLRHASYKGLRE 330
            L+AEI+F GWT DG +R A++KGLRE
Sbjct: 516 ELVAEIQFAGWTADGLVRQAAFKGLRE 542