Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 771 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score =  221 bits (563), Expect = 5e-62
 Identities = 136/353 (38%), Positives = 195/353 (55%), Gaps = 22/353 (6%)

Query: 1   MSRRAKPLLQDDSVAKSKPARPRDPAQPNLPFDPMAERIEPCLALLKPVPPKGPDWVFEV 60
           +S++A         A + P   R  A P+         + P LA LKP PP+G  W+ E+
Sbjct: 198 VSKKAGASTSGQKQAHALPKGARKQALPSF--------VPPALATLKPKPPEGSRWLHEI 249

Query: 61  KWDGYRLAIHIEPKGVRIITRGGHDWTHRF-PAIAEATSKLGVGTAILDGEAVVLDEEGR 119
           K+DGYRL   ++   ++++TR G DWT +F  A+A A + L   T ++DGE VV  + G 
Sbjct: 250 KFDGYRLQARVDQGKLQLLTRSGLDWTEKFGAAVAAALTALPAETVLIDGEIVVERDSGA 309

Query: 120 SDFGALQRSLG-GRGGKRSSTESVFFAFDLLYFDGHDLSGTELSVRRHLLEGFLDGPTGA 178
           SDF ALQ+ L  GR  +      VF+AFDLLY DG DL G  LS R+ LLE  L      
Sbjct: 310 SDFSALQQDLSEGRDDR-----FVFYAFDLLYLDGSDLRGAALSERKALLEKLLPAGDPH 364

Query: 179 IQSSEEVFGDGAL-LEKACSMGLKGIIAKHRDWPYRSGRTGDWLKIKCLQSESFMIVGYE 237
           ++ S+     GAL L+ AC + L+G+I+K +   Y SGR G+W+K KC   + F+I GY 
Sbjct: 365 LRYSQHFEESGALVLDHACRLSLEGVISKVKSSKYVSGRKGEWVKSKCSMRQEFVIGGYT 424

Query: 238 QSLTARGGLGSLLLAGRKGHDWIYVGSVGTGFNTKDAEYLRKTLDRLKT-----SKPAVP 292
            S T+   +GSL L   +     +VG VGTG++   AE +   L  L+            
Sbjct: 425 VSSTSEHAIGSLALGVYENGKLRHVGRVGTGYSGDVAEMIFSRLKPLERKDSPFGDKLTA 484

Query: 293 LKGKNLVFAQPTLIAEIEFRGWTHDGSLRHASYKGLREVQDNAAVFDMSERAI 345
           L  ++L F +P L+AE+EFR W+ DG+LRHAS++GLRE    A   +  E+A+
Sbjct: 485 LARRDLHFVKPELVAEVEFRAWSGDGNLRHASFRGLRE-DKPAGEIEREEKAV 536