Pairwise Alignments

Query, 346 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

Subject, 541 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score = 48.1 bits (113), Expect = 5e-10
 Identities = 76/300 (25%), Positives = 120/300 (40%), Gaps = 38/300 (12%)

Query: 55  DWVFEVKWDGYRLAIHIEPKGVRIITRGGHDWTHRFPAIAEATSKLGVGTAILDGEAVVL 114
           D+  E KWDG R+ +    +  ++ +R G D +  FP + +A    GV    +DGE +V 
Sbjct: 224 DYAAEWKWDGIRVQLSRAGETRKLYSRSGDDISGAFPDVLDAIEFEGV----MDGELLV- 278

Query: 115 DEEGRSD-----FGALQRSLGGR---GGKRSSTESVFFAFDLLYFDGHDLSGTELSVRRH 166
               RS+     F  LQ+ L  +      R    +   A+DLL+    D+       RR+
Sbjct: 279 GGTARSNNLTRTFSDLQQRLNRKTVTAKMRDDYPAFIRAYDLLFEGESDIRAQTYLERRN 338

Query: 167 LLEGFLD-GPTGAIQSSEEV-FGDGALLEKACSMG----LKGIIAKHRDWPYRSGRT-GD 219
            L   ++  P      S  + F   + L+   +      ++G++ K RD  Y++GR  G 
Sbjct: 339 RLSDIIERAPHDRFDLSPLIGFSSWSELDTLRAAPPDPVIEGVMIKRRDSTYQAGRAKGP 398

Query: 220 WLKIKCLQSESFMIVGYEQSLTARGGLGS--------LLLAGRKGHDWIYVGSVGTGFNT 271
           W K K        ++ Y Q     G   S        +   G  G   + VG    GF  
Sbjct: 399 WFKWKRDPYNIDAVMMYAQ--RGHGKRSSYYSDFTFGVWAEGEDGEQLVPVGKAYFGFTD 456

Query: 272 KDAEYLRKTLDRLKTSKPAVPLKGKNLVFAQPT--LIAEIEFRGWTHDGSLRHASYKGLR 329
            + E L K + R  T +   P++    V A P    + E+ F G     S RH S   +R
Sbjct: 457 AELEVLDKFV-RDNTVERFGPVRA---VRATPDFGFVLEVAFEGINR--STRHKSGVAMR 510