Pairwise Alignments

Query, 285 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 833 a.a., DNA ligase D from Pseudomonas putida KT2440

 Score = 94.0 bits (232), Expect = 1e-23
 Identities = 52/125 (41%), Positives = 69/125 (55%), Gaps = 4/125 (3%)

Query: 108 LFDLDPGPDVPFATVVAAAREMRDRLDELGLVSFCKTTGGKGLHVVTPFAVNKRKPLSWA 167
           + DLDP P +P+  +V A +     LDELGL  F KT+GGKG+HVV P      +   W 
Sbjct: 662 VLDLDPDPALPWKAMVEATQLTLTLLDELGLKVFLKTSGGKGIHVVVPLT----RRAGWD 717

Query: 168 EAKGFAHDVCEQMARDNPDLYLIKMSKSLRGGRIFLDYLRNDRMATAVAPLSPRARPGAT 227
           E K F+H +   +A+  P+          R GRIF+DYLRN + AT     S RAR G  
Sbjct: 718 EVKDFSHAIVNYLAKLFPERLSAVSGPKNRVGRIFIDYLRNGKGATTACAYSLRARDGLP 777

Query: 228 VSMPL 232
           VS+P+
Sbjct: 778 VSVPI 782



 Score = 61.2 bits (147), Expect = 7e-14
 Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 18/107 (16%)

Query: 1   MKPELVAEIEFAGWTADGLVRQAAFKGLREDKPAKEVQAEKPSPPAKTDTPEPGPSAKTR 60
           ++P+L+AE+ FA  T DG+VR + F GLR+DK A  +  E+  P            AKT 
Sbjct: 483 LRPQLLAEVAFAQMTRDGIVRHSVFHGLRDDKAATAIDLERAMP------------AKTV 530

Query: 61  PVRRKGAKA-EVMGVL-ISSPDKPLWPDAGDGEPVTKEDLARYHEAV 105
             R K AKA E +G L ++ PD+ + P  G    VTK ++A Y+  +
Sbjct: 531 SNRNKQAKASENLGELRLTHPDRVIDPTTG----VTKREVAEYYAGI 573