Pairwise Alignments

Query, 556 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 543 a.a., DNA ligase from Xanthobacter sp. DMC5

 Score = 55.5 bits (132), Expect = 5e-12
 Identities = 67/230 (29%), Positives = 95/230 (41%), Gaps = 38/230 (16%)

Query: 216 WDSKHGLAAEERKKGSRRDVATSTAADLPDFIEPQLCETLARPPASDDWLHEIKFDGYRI 275
           W    G   E       R V  + A +  DF       TL     S +W    K+DG R+
Sbjct: 184 WVEGRGPRPETSNPAPFRPVMLAHAIEEADFT------TLDPAAFSAEW----KWDGIRV 233

Query: 276 QMRIADGK-----VTLKTRKGLDWTAKYPEIADAASELPDCIIDGEICALDDNGAPDFAA 330
           Q     G      V L +R G D +  +P++A+A +   D  +DGE+  + D     F  
Sbjct: 234 QAVAGTGPDGVRVVRLYSRTGEDISDAFPDMAEAITF--DGAMDGELLIVRDGRVEPFNV 291

Query: 331 LQAALSEGKTGNLVYFA--------FDLLFDGGEDLRSMRLVERKKRLEDFLAAGSDDPR 382
           LQ  L+  KT  +   A        +DLL DG +DLR      R+ RLE  L A    PR
Sbjct: 292 LQQRLNR-KTVTVKMLAEFPAHIRAYDLLVDGTDDLREQPFAARRARLE-ALVARLQTPR 349

Query: 383 IRY--VDHFESGGD--AVLRSACKL-------SLEGIVSKQMDAPYQSGR 421
           I    +  F +  D  A  R            ++EG++ K+ D+PY  GR
Sbjct: 350 IDLSPMVPFSTWEDLTAARRDPASAGAGADAGAVEGVMIKRADSPYLPGR 399