Pairwise Alignments

Query, 556 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 364 a.a., ATP-dependent DNA ligase from Sinorhizobium meliloti 1021

 Score =  181 bits (459), Expect = 4e-50
 Identities = 108/273 (39%), Positives = 151/273 (55%), Gaps = 11/273 (4%)

Query: 228 KKGSRRDVATSTAADLPDFIEPQLCETLARPPASDDWLHEIKFDGYRIQMRIADGKVTLK 287
           +  S++   T     +P  I+P L   + RPP   DW  E+K+DGYRI + I  G+V + 
Sbjct: 3   RASSKKPRDTPPLDPMPARIDPCLASLVDRPPKGPDWAFEVKWDGYRIAVHIEPGRVRIL 62

Query: 288 TRKGLDWTAKYPEIADAASEL--PDCIIDGEICALDDNGAPDFAALQAAL----SEGKTG 341
           TR G DWT ++P I D A  L     I+DGE   LDD G  DF  LQ AL    S  + G
Sbjct: 63  TRGGYDWTERFPTIVDDARRLAVKTAILDGEAVVLDDKGRSDFGMLQRALGRLPSAVEAG 122

Query: 342 NLVYFAFDLLFDGGEDLRSMRLVERKKRLEDFLAAGSDDPRIRYVDHFESGGDAVLRSAC 401
            +V++AFDLL+  G DLR + L ER++ LE  +AA   +  +R  +  ++ GD   R AC
Sbjct: 123 AIVFYAFDLLYLDGHDLRRLPLRERRRLLEPLVAA--REGAVRLSEELQADGDEFFRVAC 180

Query: 402 KLSLEGIVSKQMDAPYQSGRTDTWAKSKCRAGHEVVIGGY--ATTNGKFRSLLVGVHRGD 459
              LEGI++K ++ PY+SGR + W K  C++    VI G+  +T  G    LL+    GD
Sbjct: 181 AHGLEGIIAKHIEKPYRSGRGEWWQKITCKSRDSFVIVGFEPSTVPGHLGRLLLAAREGD 240

Query: 460 HFVYVGRVGTGFGAAKVERFFPKLKALEASKSP 492
             VYVG  GTG+ + K+ R   KL    A+KSP
Sbjct: 241 EPVYVGGCGTGW-SNKLSRELRKLLEGMATKSP 272