Pairwise Alignments

Query, 556 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 884 a.a., ATP-dependent DNA ligase from Agrobacterium fabrum C58

 Score =  814 bits (2103), Expect = 0.0
 Identities = 393/511 (76%), Positives = 442/511 (86%), Gaps = 4/511 (0%)

Query: 2   ADNLSKDRAKRDFKKTREPSGEAQVKPSNRRRFVIQKHDATRLHYDLRLELDGVFKSWAV 61
           +D LS  + KRDF+KT+EPSG A++K SNRRRFVIQKHDATRLHYDLRLELDGVFKSWAV
Sbjct: 3   SDKLSTYKQKRDFQKTQEPSGAAKLKASNRRRFVIQKHDATRLHYDLRLELDGVFKSWAV 62

Query: 62  TKGPSLDPSDKRLAVEVEDHPLDYGDFEGTVPKGQYGGGTVMLWDRGYWEPEGRKSPEEA 121
           TKGPSLDP DKRLAVEVEDHPLDYGDFEGT+PKGQYGGGTVMLWDRGYWEPEG K+PE+A
Sbjct: 63  TKGPSLDPHDKRLAVEVEDHPLDYGDFEGTIPKGQYGGGTVMLWDRGYWEPEGNKTPEQA 122

Query: 122 LKKGDFKFTLHGKRLHGSFVLVRMRNDRDGGKRTNWLLIKHRDDYSVDENGAAILEENAT 181
           L KGDFKFTL G+RLHGSFVLVRMRNDRDGGKRTNWLLIKHRDD+SV+E GAA+L+EN T
Sbjct: 123 LAKGDFKFTLEGERLHGSFVLVRMRNDRDGGKRTNWLLIKHRDDFSVEEKGAAVLDENDT 182

Query: 182 SVASGRSMEQIAEGTGRKPRPFMMANADVEADAVWDSKHGLAAEERK---KGSRRDVATS 238
           SVASGR+ME IA G GRKP+PFM+ + DV+ADAVWDS HGLAAEER    K  R+     
Sbjct: 183 SVASGRTMEAIAAGKGRKPKPFMVQSGDVQADAVWDSNHGLAAEERASDTKAKRKPALKK 242

Query: 239 TA-ADLPDFIEPQLCETLARPPASDDWLHEIKFDGYRIQMRIADGKVTLKTRKGLDWTAK 297
            A + +P+FI PQLCETL RPP++  W+HEIKFDGYRIQ RI +G+VTLKTRKGLDWTAK
Sbjct: 243 PAKSTMPEFIPPQLCETLDRPPSAKGWIHEIKFDGYRIQTRIENGEVTLKTRKGLDWTAK 302

Query: 298 YPEIADAASELPDCIIDGEICALDDNGAPDFAALQAALSEGKTGNLVYFAFDLLFDGGED 357
           YP IA +A+ LPD IIDGEICALD+NGAPDFAALQAALSEGKT  LVYFAFDLLF+  ED
Sbjct: 303 YPAIATSAANLPDAIIDGEICALDENGAPDFAALQAALSEGKTDELVYFAFDLLFEENED 362

Query: 358 LRSMRLVERKKRLEDFLAAGSDDPRIRYVDHFESGGDAVLRSACKLSLEGIVSKQMDAPY 417
           LR + L ERK+RL+  L    +DPR+R+V+HFE+GGDAVL+SACKLSLEGIVSKQ DAPY
Sbjct: 363 LRQLPLTERKERLQTLLDDAGEDPRLRFVEHFETGGDAVLKSACKLSLEGIVSKQADAPY 422

Query: 418 QSGRTDTWAKSKCRAGHEVVIGGYATTNGKFRSLLVGVHRGDHFVYVGRVGTGFGAAKVE 477
           QSGRT+TWAKSKCRAGHEVVIG YA TNGKFRSLLVGV +GDHFVYVGRVGTG+GA  V+
Sbjct: 423 QSGRTETWAKSKCRAGHEVVIGAYAKTNGKFRSLLVGVFKGDHFVYVGRVGTGYGAKTVD 482

Query: 478 RFFPKLKALEASKSPFTGIGAPKKEKEVTWL 508
              P+L+ LE SKSPFTGIGAPKK+  V W+
Sbjct: 483 TILPRLRELETSKSPFTGIGAPKKDPNVVWV 513