Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 264 a.a., Inner membrane ABC transporter permease protein YdcV from Xanthobacter sp. DMC5

 Score =  142 bits (357), Expect = 9e-39
 Identities = 80/240 (33%), Positives = 131/240 (54%)

Query: 20  LMLSAPTVVVLGASFTAGNIITFPPDGLSLKWYGAIAQASDLRQAFVRSLIVATICTLVS 79
           L L AP +VVL  SF+  + + FPP   S+KWYGAI   S +  AF  SL +A + T +S
Sbjct: 19  LFLLAPLLVVLPISFSGDDFMAFPPSSWSVKWYGAIFANSVMMNAFWISLALAFVVTALS 78

Query: 80  IPVGTLAGIALAKYRVRFARSIQIYLLLPFTIPLIGSGIGMMLVLGNMGVLGKLWPVGIA 139
           + +G  A  AL + +   A ++      P  +P I  G+ ++LV   MG++G    +  A
Sbjct: 79  LGIGLPAAYALVRLKPPGAEALSNLFSAPLLLPTIVLGLALLLVFAPMGLIGSFQGLVAA 138

Query: 140 CAVINLPFMIWAVTASASNLSPDLELAAANCGAPPLQRFLYITLPAVLPGVITGSLLMFI 199
             ++ LP+ +  ++ + +NL   +E AA   GA PL  F  +TLP +  G+++ + L F+
Sbjct: 139 HLIVTLPYAVRVLSTALANLPLTVEEAAGMLGARPLTVFFRVTLPMMRSGLVSTTALCFL 198

Query: 200 LALNEFLVSLLLVDARSVTLPVQIYNSIRSIITPDLAAISVVFIACAGLAIALLDRLVGL 259
           ++ +E ++SL +   R  TLPV +YN +     P  AAISV+ +      + ++DR  GL
Sbjct: 199 VSFDEVVLSLFMTGPRLQTLPVAMYNHVDQQADPMAAAISVLLVVLTLAVVLVVDRTAGL 258