Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 269 a.a., spermidine/putrescine ABC transporter permease from Pseudomonas simiae WCS417

 Score = 90.5 bits (223), Expect = 3e-23
 Identities = 63/244 (25%), Positives = 116/244 (47%), Gaps = 5/244 (2%)

Query: 4   SKSKSFVLWAFVTTALLMLSAPTVVVLGASF-TAGNIITFPPDGLSLKWYGAIAQASDLR 62
           S+  S  L       L+ L  P +++   +F T     +FPP G +LKW+       D+ 
Sbjct: 3   SEKSSMSLKIAAWGGLVFLHFPILIIFLYAFNTEEAAFSFPPQGFTLKWFSVAFARPDVL 62

Query: 63  QAFVRSLIVATICTLVSIPVGTLAGIALAKYRVRFARSIQIYLLLPFTIPLIGSGIGMML 122
           +A   SL +A I TL+++ +GTLA  AL +      + + + L+LP  +P I +GI ++ 
Sbjct: 63  EAIKLSLQIAAIATLIAMVLGTLASAALYRREFFGKQGVSLMLILPIALPGIITGIALLA 122

Query: 123 VLGNMGVLGKLWPVGIACAVINLPFMIWAVTASASNLSPDLELAAANCGAPPLQRFLYIT 182
               +G+   ++ + +  A   +  +   V A     S  L  A+ + GA   Q F YI 
Sbjct: 123 TFKTLGIEPGMFTIIVGHATFCVVIVYNNVIARLRRTSHSLIEASMDLGADGWQTFRYII 182

Query: 183 LPAVLPGVITGSLLMFILALNEFLVSLLLVDARSVTLPVQIYNSI---RSIITPDLAAIS 239
           +P +   ++ G +L F L+ +E +V+         TLP+ + N +   R +   ++ A+ 
Sbjct: 183 MPNLGSALLAGGMLAFALSFDEIIVTTFTA-GHERTLPLWLLNQLSRPRDVPVTNVVAML 241

Query: 240 VVFI 243
           V+ +
Sbjct: 242 VMLV 245