Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 264 a.a., ABC-type spermidine/putrescine transport system, permease component II from Variovorax sp. SCN45

 Score =  129 bits (324), Expect = 6e-35
 Identities = 83/252 (32%), Positives = 130/252 (51%), Gaps = 8/252 (3%)

Query: 13  AFVTTALLMLSAPTVVVLGASFTAGNIITFPPDGLSLKWYGAIAQASDLRQAFVRSLIVA 72
           AF    ++ + AP VVV   +FT  N +T P    SL+W+ A+    D  Q+F  SL +A
Sbjct: 10  AFNALVIVFMLAPLVVVCIVAFTPENTLTIPTTRFSLRWFEAVFAHPDFMQSFWNSLWLA 69

Query: 73  ----TICTLVSIPVGTLAGIALAKYRVRFARSIQIYLLLPFTIPLIGSGIGMMLVLGNMG 128
               TI TL+++P    AG+A+ +Y       +    L P  +P +  G+ ++ +   +G
Sbjct: 70  LSSATIATLLAVP----AGMAITRYEFAGRDFLNGLFLSPLIVPHLVLGVALLRLFALVG 125

Query: 129 VLGKLWPVGIACAVINLPFMIWAVTASASNLSPDLELAAANCGAPPLQRFLYITLPAVLP 188
             G    + +A A+I  P+ +  V A+        E AA + GA     F  ITLP +LP
Sbjct: 126 GTGSFGWLVMAHALIVTPYTLRLVVAALVGFDRSAEQAALSLGASQATVFRRITLPMILP 185

Query: 189 GVITGSLLMFILALNEFLVSLLLVDARSVTLPVQIYNSIRSIITPDLAAISVVFIACAGL 248
           GV  G +L FI + +E  +S+ +    +VTLPV++Y      I P +AA+S + +A    
Sbjct: 186 GVTGGWMLAFINSFDEVTMSIFVTAPSTVTLPVRMYMYATESIDPLMAAVSALMVAVTAC 245

Query: 249 AIALLDRLVGLD 260
           A+ LLDR+ GLD
Sbjct: 246 AMVLLDRIYGLD 257