Pairwise Alignments

Query, 266 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 561 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  106 bits (264), Expect = 1e-27
 Identities = 72/254 (28%), Positives = 125/254 (49%), Gaps = 9/254 (3%)

Query: 7   KSFVLWAFVTTALLMLSAPTVVVLGASF--TAGNIITFPPDGLSLKWYGAIAQASDLRQA 64
           KSF++  F    + +   P++ V+  SF  T+G + T    G  L  Y  I +  D  QA
Sbjct: 304 KSFIVHGFCYLVVFIAMLPSLTVIYTSFLATSGPVFT---GGFGLDSYSRILR--DSPQA 358

Query: 65  FVRSLIVATICTLVSIPVGTLAGIALAKYRVRFARSIQIYLLLPFTIPLIGSGIGMMLVL 124
              S + A    ++   V  L    + +     + S+ + L++P+ IP +   IG +   
Sbjct: 359 IANSFMFALAAVVLIAIVSGLLSFIVVRRDNAVSGSLDLLLMVPYLIPGVVMAIGYVTTF 418

Query: 125 GN--MGVLGKLWPVGIACAVINLPFMIWAVTASASNLSPDLELAAANCGAPPLQRFLYIT 182
                 + G    + +   +  LP+ + + T+    + P +E AA N GA P + FL +T
Sbjct: 419 RYPPFDITGTALIIVLLVFIRRLPYGVRSTTSILRQIKPSIEEAAVNLGASPAKTFLSVT 478

Query: 183 LPAVLPGVITGSLLMFILALNEFLVSLLLVDARSVTLPVQIYNSIRSIITPDLAAISVVF 242
           +P +LPG+I GSL+ FI A+NE   +L+L  AR++T+PV IY  +        AA+S + 
Sbjct: 479 VPLMLPGLIIGSLMSFITAINELSSTLILYTARTITMPVLIYIQVIDGEFGTAAALSTLL 538

Query: 243 IACAGLAIALLDRL 256
           +   G+ + ++ RL
Sbjct: 539 LVSTGVCVFVVFRL 552



 Score = 56.6 bits (135), Expect = 1e-12
 Identities = 57/205 (27%), Positives = 95/205 (46%), Gaps = 16/205 (7%)

Query: 64  AFVRSLIVATICTLVSIPVGTLAGIALAKYRVRFARSIQIYLLLPFTIP-LIGSGIGMML 122
           A   +L++  +  L +  +G       ++YR++    I  + +L    P  IG+   +ML
Sbjct: 73  ALWNTLVIGVLGMLGACLLGIPLAFCTSRYRIKGRTFIATFAVLVLCAPPFIGAYAWIML 132

Query: 123 VLGNMGVLGKLWPVGIACAVI----------NLPFM--IWAVTASASN-LSPDLELAAAN 169
              N  V   L   GI+   I          +L F   I+ +T +A N ++   E AA N
Sbjct: 133 FGANGAVTNLLSFAGISLPTIYGIPGIVMVFSLKFFPYIYLMTENALNTINKSYEDAAEN 192

Query: 170 CGAPPLQRFLYITLPAVLPGVITGSLLMFILALNEF-LVSLLLVDARSVTLPVQIYNSIR 228
            G    QRF  ITLP V P V TG+++ F+L++ +F   ++L    R+++       +  
Sbjct: 193 LGCTAFQRFRKITLPLVFPAVSTGAIICFVLSIADFGTPAILGKGIRTLSTIAYAQYTSE 252

Query: 229 SIITPDLA-AISVVFIACAGLAIAL 252
              TP +A  IS+V IA +  A+ L
Sbjct: 253 MAGTPTMAVTISMVMIAISMAALLL 277