Pairwise Alignments

Query, 314 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 305 a.a., Putrescine transport system permease protein PotH from Xanthobacter sp. DMC5

 Score =  114 bits (286), Expect = 2e-30
 Identities = 88/273 (32%), Positives = 135/273 (49%), Gaps = 20/273 (7%)

Query: 34  LPYLMLMPALVLVGLLVLGLVQIG-------------DTSLRTLDTNTFLMSESYTLANY 80
           +PYL L+ AL L   L++  + +              D S        FL   S+  ANY
Sbjct: 17  VPYLWLL-ALFLAPFLIVFKISLSQDVVAQPPYAPQLDLSNGLAGITEFLSGLSF--ANY 73

Query: 81  QRVLTESF-FATVAGRSLVGSVIVTVITLLLAFPYAYLMVRTPSSALRKFLLVALFLPFF 139
             VL  S  F    G SLV + I T++ LL+ +P AY M R P S ++  LL+ + LPF+
Sbjct: 74  GYVLDFSNEFLEAYGSSLVIASISTLLLLLVGYPIAYGMARAPRS-IQPTLLMLVILPFW 132

Query: 140 IGQVVRAYGWLIILGNQGMVNEALGLVGV--PPIRLLYNYPAVLFGLVQYMLPFAVLMLA 197
              ++R Y W+ IL  +G++N+ L  +GV   P+ +L    AV  G+V   LPF VL L 
Sbjct: 133 TSFLIRVYAWIGILSPEGLLNQGLMALGVIDTPLEILNTNLAVYIGIVYSYLPFMVLPLY 192

Query: 198 PALTAIPSELEAAAASLGAGWTRTFRHIVLPLSRPGLVGAGLVVLTLSLTDFAIPAILGG 257
            AL  +   L  AAA LG    + F  I  PLS PG+    L+    ++ +F IP +LGG
Sbjct: 193 SALEKLDLTLLEAAADLGCPPVKAFWKITFPLSIPGVAAGALLCFIPAVGEFVIPDLLGG 252

Query: 258 GTQDFIANAIYDQFFRTSDQGMGATLSLMLVAV 290
                I  +++ +F       + + ++++L+ V
Sbjct: 253 SDTLMIGKSLWTEFTVNRSWTVSSAVAVLLLLV 285