Pairwise Alignments

Query, 371 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 345 a.a., no description from Variovorax sp. SCN45

 Score = 75.1 bits (183), Expect = 3e-18
 Identities = 88/344 (25%), Positives = 144/344 (41%), Gaps = 36/344 (10%)

Query: 7   LSAQIGRRTLLASMAAAGASAGLSTLGVSRAFAQEPEKPAEIIVRAWGGSWVDALKAGVS 66
           +S+   RR+LL       A+A L     + AFA    +   +++  WGG + D L   V 
Sbjct: 1   MSSHSTRRSLLL------AAASLPLAASAPAFAAVGGR---VVIATWGGDYGDLLGKNVE 51

Query: 67  DSFTKMTGIAVRHDLTEDNEIQPKVWAAVAQKRVPPIHINWDTTTNATKSALRGVTEDLS 126
               K  GI      T+D   +     A    R   + +       A+  A  G+ E L+
Sbjct: 52  QPLLKPRGIEAVQS-TDDGPPRKAKLLAERNSRRGSLDVVSLVDFEASGLAQMGLFETLT 110

Query: 127 D--LPNLKNA-TDLAKPVGLDGYPIVNTYGYVY---VLAYRPSAFPNGAPKSWKDLLDPK 180
           D  +PN +NA   L +P  +          +VY   V+AY P       PKS+ DL DPK
Sbjct: 111 DANVPNARNAIAALRQPQAVP---------HVYSGLVIAYNPDKIRT-PPKSFNDLWDPK 160

Query: 181 LKGRIALYNDGIGFHF-PAQVAGGGKLEDIPANMQPAWDFISKIKEQQPLLGEDPDFTTW 239
            KGR+ L      ++   A +A GG L D+   M+     + ++K   P +    +    
Sbjct: 161 YKGRVGLAEILFPYNIAAASLAAGGTLSDLAPGMKK----LGEMKALSPKIFATNEAVAQ 216

Query: 240 FQKGEIDAACTISTNAR--EAKKNGIEIAWVVPEEGAKFDTDGLWIPKGLPENELYWAKQ 297
             K E D   T++  AR  + ++ G+ +A  VP EG    T    +PK   + +  +A  
Sbjct: 217 ALKSE-DIWITLAWRARVYQWRRAGVSVAAAVPAEGIMPTTFSAVVPKNSQQKDNAFA-- 273

Query: 298 YINHALTKEAQQIWLDGLGLPGVIPGITPPADLVGDPSYPTTEE 341
           Y++  L   AQ  + + +G    +     PA+L    ++   E+
Sbjct: 274 YLDAMLDARAQAAFAERMGYVPTVTNARLPAELAAQIAFTPEEQ 317



 Score = 24.6 bits (52), Expect = 0.004
 Identities = 14/47 (29%), Positives = 26/47 (55%), Gaps = 2/47 (4%)

Query: 253 TNAREAKKNGIEIAWVVPEEGAKFDT-DGLWIPKGLPENELYWAKQY 298
           TNAR   +   +IA+  PEE ++F   D  +  + +P  + YW++ +
Sbjct: 298 TNARLPAELAAQIAFT-PEEQSRFKVPDFGYFAQAMPALQQYWSRDF 343