Pairwise Alignments

Query, 400 a.a., TRm3 transposase from Sinorhizobium meliloti 1021

Subject, 403 a.a., hypothetical protein from Sphingobium sp. HT1-2

 Score =  122 bits (307), Expect = 1e-32
 Identities = 91/365 (24%), Positives = 170/365 (46%), Gaps = 18/365 (4%)

Query: 22  GKDGLLDDLKKALSERILNAELDDHLDVERLE--GGPANRRNGSSKKTVLTGTSKMTLTI 79
           G    L  + +++ + I+ A++D  +   R E  G     RNG   +++ T    + L I
Sbjct: 16  GDGDFLRTIAESVLQIIMEADVDGLVGAGRHERSGERTTWRNGYRDRSLDTRLGTLNLKI 75

Query: 80  PRDRAGTFDPKLIARYQRRFPDFDDKIISMYARGMTVREIQGHLEELYGIDVSPDLISAV 139
           P+ R G + P  +   +         I   +  G++ R +   ++ +    +S   +S +
Sbjct: 76  PKLRTGAYFPGFLEPRKTVEKALVAVIQEAWIAGVSTRRVDELVQAMGMTGISKSSVSKL 135

Query: 140 TDTVLEAVGEWQNRPLELCYPLVFFDAIRVKIRDEGFVRNKAVYVALAVLADGSKEILGL 199
              + E V  +  RPL   +P ++ DA  +K+R+ G + + A  +A+AV  +G +EI+GL
Sbjct: 136 CKDIDERVHAFLKRPLAGDWPYLWLDATYLKVREGGRIVSVAAIIAVAVNTEGRREIVGL 195

Query: 200 WIEQTEGAKFWLRVMNELKNRGCQDILIAVVDGLKGFPEAITAVFPQTIVQTCIVHLIRH 259
            I  +E   FW   + +L  RG   + + + D  +G   AIT V   T  Q C VH +R+
Sbjct: 196 HIGPSEAEPFWSTFLKDLTRRGLTGVKLVISDAHEGLKAAITRVLSAT-WQRCRVHFMRN 254

Query: 260 SLEFVSYKDRRTVVPALRAIYRARDAEAGLKALEAFEEGYWGQKYPAIAQSWRR------ 313
           +L +V       V  A+R ++   D  A  +         W Q    +   W +      
Sbjct: 255 ALAYVPKGQNTVVAAAIRQVFLQPDHAAATQV--------WRQVADQLRARWPKLGACMD 306

Query: 314 NWEH-VVPFFAFPEGVRRIIYTTNAIEALNSKLRRAVRSRGHFPGDEAAMKLLYLVLNNA 372
           + EH V+ +  FPE  R  +++TN +E LN +++R     G FP +++ ++L+  VL   
Sbjct: 307 DAEHDVLAYMTFPEQHRVKLHSTNPLERLNKEVKRRADVVGIFPNEDSIIRLVGAVLLEQ 366

Query: 373 AEQWK 377
            ++++
Sbjct: 367 NDEYQ 371