Pairwise Alignments

Query, 400 a.a., TRm3 transposase from Sinorhizobium meliloti 1021

Subject, 402 a.a., IS256 family transposase from Erwinia tracheiphila SCR3

 Score =  352 bits (902), Expect = e-101
 Identities = 176/369 (47%), Positives = 244/369 (66%), Gaps = 2/369 (0%)

Query: 30  LKKALSERILNAELDDHLDVER-LEGGPANRRNGSSKKTVLTGTSKMTLTIPRDRAGTFD 88
           L K   E  LNAEL DHL  ++       N RNG S KT+L    ++ L  PRDR  TF+
Sbjct: 30  LTKLTVETALNAELTDHLGHKKNAPKTSTNTRNGYSSKTLLCDDGEIGLNTPRDRENTFE 89

Query: 89  PKLIARYQRRFPDFDDKIISMYARGMTVREIQGHLEELYGIDVSPDLISAVTDTVLEAVG 148
           P+LI + Q R    D +I+S+YA+GMT REI    +E+Y  DVSP LIS VTD V E V 
Sbjct: 90  PQLIKKNQTRITQMDSQILSLYAKGMTTREIVDTFKEMYDADVSPALISKVTDAVKEQVA 149

Query: 149 EWQNRPLELCYPLVFFDAIRVKIRDEGFVRNKAVYVALAVLADGSKEILGLWIEQTEGAK 208
           EWQNR L+  YP+V+ D I VK+R  G V NKAV++A  +  +G KE+ G+W+ + EGAK
Sbjct: 150 EWQNRQLDALYPIVYLDCIVVKVRQNGSVINKAVFLAPGINTEGRKELPGMWLAENEGAK 209

Query: 209 FWLRVMNELKNRGCQDILIAVVDGLKGFPEAITAVFPQTIVQTCIVHLIRHSLEFVSYKD 268
           FWL V+ ELKNRG QDILIA VDGLKGFP+AI +V+P+T +Q CI+H++R+ L++V++KD
Sbjct: 210 FWLNVLTELKNRGLQDILIACVDGLKGFPDAINSVYPETHIQLCIIHMVRNRLKYVAWKD 269

Query: 269 RRTVVPALRAIYRARDAEAGLKALEAFEEGYWGQKYPAIAQSWRRNWEHVVPFFAFPEGV 328
            + V   L+ +Y+A    A   AL AF E  W  KYP I++SWR + E++  FF +P  +
Sbjct: 270 YKAVTGGLKTVYQAPTEAAARMALAAFAE-EWDDKYPQISKSWRAHGENLNTFFGYPSDI 328

Query: 329 RRIIYTTNAIEALNSKLRRAVRSRGHFPGDEAAMKLLYLVLNNAAEQWKRAPREWVEAKT 388
           R+ IYTTNAIE+LNS  R A++ R  FP D++  K++YL + +A+++W    + W  A  
Sbjct: 329 RKSIYTTNAIESLNSVNRAAIKKRKVFPTDDSVRKVIYLAIQSASKKWSMPVQNWRLAMN 388

Query: 389 QFAVIFGER 397
           +F + FG+R
Sbjct: 389 RFIIGFGDR 397