Pairwise Alignments

Query, 304 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 310 a.a., putative HTH-type transcriptional regulator YahB from Escherichia coli HS(pFamp)R (ATCC 700891)

 Score = 75.5 bits (184), Expect = 1e-18
 Identities = 78/299 (26%), Positives = 128/299 (42%), Gaps = 13/299 (4%)

Query: 12  LRVFIAVVETGSFAAAARKLNRATSVISYTIANLEAQLGVTLFDRLSTKKPQLTLEGRTV 71
           L V  AV   GSF+AAA++L+R  S +SYT+  LE  L V LF+R   +  +LT  G   
Sbjct: 7   LEVVDAVARNGSFSAAAQELHRVPSAVSYTVRQLEEWLAVPLFER-RHRDVELTAAGAWF 65

Query: 72  LAEARSVSNGIDNLRAKVKSMLRGIEPEVHLALDVMLPASRVMDALKAFRKEFPSVSLRL 131
           L E RSV   +   R + + +  G   ++ +A+D ++   R    +  F + F  V L +
Sbjct: 66  LKEGRSVVKKMQITRQQCQQIANGWRGQLAIAVDNIVRPERTRQMIVDFYRHFDDVELLV 125

Query: 132 YVEALGAVTQIVLNRTATVGISGPLDVDVLGLERI-GVGFVQLVPVAAPDHPLA--GGSH 188
           + E    V   + +    + I     + V G      +G +    V A  HPLA   G  
Sbjct: 126 FQEVFNGVWDALSDGRVELAIGATRAIPVGGRYAFRDMGMLSWSCVVASHHPLALMDGPF 185

Query: 189 APGAARSHIQLVLTDRS-PLTQGHEFAVVGTHTWRLADLGAKHMLLKEGIGWGNMPEPMV 247
           +    R+   LV  D S  L +   + +       + D  +    +  G+  G +P    
Sbjct: 186 SDDTLRNWPSLVREDTSRTLPKRITWLLDNQKRLVVPDWESSATCISAGLCIGMVPTHFA 245

Query: 248 RDDLADGRLVQLDLPDCKGGPYRLQAIYRT--DTPPGPAGRFLIEHFQAQDAKTPTTAW 304
           +  L +G+ V L+L +    P+   A   T       PA  +L+E+    D++T    W
Sbjct: 246 KPWLNEGKWVALELEN----PFPDSACCLTWQQNDMSPALTWLLEYL--GDSETLNKEW 298