Pairwise Alignments

Query, 295 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 312 a.a., Nodulation protein d1 from Pseudomonas putida KT2440

 Score =  107 bits (268), Expect = 3e-28
 Identities = 87/285 (30%), Positives = 138/285 (48%), Gaps = 16/285 (5%)

Query: 1   MNLRSLDLNLLVVLDALLDEAHVSRAADRLGLSQPAASAALQRCRHLFRDELLERGRGTM 60
           M    LDLNLLV LD LL+E +++RAA+RL ++Q A S  L R R  F DELL +    M
Sbjct: 1   MRFHHLDLNLLVALDILLEEQNITRAAERLHMTQSATSGVLGRLRTFFEDELLVQVGRKM 60

Query: 61  RLTSRAEALRAPLKSLLASM-MELIGPPEIPLTEIRQVLRITMADYPALFVIAQLQRELQ 119
           + T  A  L  P++ +L ++   +   P       ++  R+  +DY    V AQ+ +++ 
Sbjct: 61  QPTPYALELAKPVREVLLTIRASITAKPVFDPAASKRHFRLVASDYLISVVFAQVIQKIH 120

Query: 120 PSAPGIDLVIQSWHGGDAARSALVDGTADLAVSVFTAPDDDL---HREELLTE--HYVVV 174
             AP   +  +    GD++   L+ G  D+ +     P+  L   H  +LL E  H  VV
Sbjct: 121 QEAP--QITFEMIGPGDSSAELLMRGEVDMMI----VPERYLIEGHPAQLLFEEDHVCVV 174

Query: 175 MRAGHPAAEAFDLNAWLSYPHILVS-GRGDTTTPLDAELSRFGLSRRVGLVVPNFQMVPS 233
            R      E   L  ++   HI V  GR    +  D  ++++G +RR+ ++  +F  +P 
Sbjct: 175 WRDNPEVGEHLTLEQYMQMGHISVGFGRNRHLSIEDWFMNQYGFNRRLEVITNDFNTLPQ 234

Query: 234 LLQDSDMIAMLPSR-ATPSGGSLVSFL--PPIPVPGFQLHMAWHR 275
           LL  +  +A +  R A    G L   L  PP+ +P  +  M WHR
Sbjct: 235 LLVGTVRVATMHRRLAELYAGYLPLRLLPPPVKIPVMREFMLWHR 279