Pairwise Alignments

Query, 420 a.a., hypothetical protein from Sinorhizobium meliloti 1021

Subject, 258 a.a., 4-carboxymuconolactone decarboxylase (EC 4.1.1.44) from Variovorax sp. SCN45

 Score = 68.6 bits (166), Expect = 2e-16
 Identities = 62/228 (27%), Positives = 105/228 (46%), Gaps = 24/228 (10%)

Query: 168 IAPDFVNWREHTLGEEIFGAVHLEPRLAHLASAAMLAARGKVGASFDAHIVSALAAGATD 227
           +AP    + +  L  +++    L  R   + +AA L AR +  A   A+   AL +G   
Sbjct: 38  VAPALERYAQDVLLGDVWKRPGLSARDRGVVTAAALIARNQT-AEMAAYFDRALDSGVKP 96

Query: 228 SDIVEMVIQLSVYSGFPAALNAAGRARNVLA-----APERPQASTQKGVDTTKDDEKRFM 282
           +++ E++  L+ YSG+  A+ A   A+NV A     A + P AS     +    D+    
Sbjct: 97  AELSEIITHLAFYSGWGNAMAAVSVAKNVYAERKIGADQLPPASP----ELLPLDKAAEA 152

Query: 283 RGVATLAETSGGSGADVVDSFKDVAPGLGRLIVAHCYGDIFCRPALDPKVRELGAISALA 342
           +  A + +  G     VV    DV            + D++ RPAL P+ R L  ++AL 
Sbjct: 153 QRAARVEQDVGPLSQGVVQYTGDV-----------LFKDLWLRPALAPRDRSLVTVTALI 201

Query: 343 AQGTVAAEKPLGVHIDAALNLGATPEEIVETLFNIIPYAGYPLIEKAL 390
           A G VA    +  H++ A++ G T  E+ E L ++  Y G+P +  A+
Sbjct: 202 ASGQVA---QIPYHLNRAMDNGLTKPEVSEMLAHLAFYVGWPNVFTAI 246



 Score = 67.0 bits (162), Expect = 6e-16
 Identities = 57/223 (25%), Positives = 103/223 (46%), Gaps = 17/223 (7%)

Query: 46  SFSEDLARFTIQYPYGDVLSRDGLDLRTRQILTAATLLAHGSAQSQLSFHLYGLLNAGGT 105
           S +  L R+      GDV  R GL  R R ++TAA L+A     ++++ +    L++G  
Sbjct: 37  SVAPALERYAQDVLLGDVWKRPGLSARDRGVVTAAALIARNQT-AEMAAYFDRALDSGVK 95

Query: 106 RADVVDLLFISAGLLGFPTAINAVPIVRDILADRDETKNVAGAQTSPAVPD-MPSDRFAV 164
            A++ +++   A   G+  A+ AV + +++ A+R     +   Q  PA P+ +P D+ A 
Sbjct: 96  PAELSEIITHLAFYSGWGNAMAAVSVAKNVYAER----KIGADQLPPASPELLPLDKAAE 151

Query: 165 LDR----------IAPDFVNWREHTLGEEIFGAVHLEPRLAHLASAAMLAARGKVGASFD 214
             R          ++   V +    L ++++    L PR   L +   L A G+V A   
Sbjct: 152 AQRAARVEQDVGPLSQGVVQYTGDVLFKDLWLRPALAPRDRSLVTVTALIASGQV-AQIP 210

Query: 215 AHIVSALAAGATDSDIVEMVIQLSVYSGFPAALNAAGRARNVL 257
            H+  A+  G T  ++ EM+  L+ Y G+P    A    + V+
Sbjct: 211 YHLNRAMDNGLTKPEVSEMLAHLAFYVGWPNVFTAIPVVKGVV 253



 Score = 46.6 bits (109), Expect = 8e-10
 Identities = 29/94 (30%), Positives = 52/94 (55%), Gaps = 7/94 (7%)

Query: 51  LARFTIQYPYGDVLSRD-----GLDLRTRQILTAATLLAHGSAQSQLSFHLYGLLNAGGT 105
           L++  +QY  GDVL +D      L  R R ++T   L+A G   +Q+ +HL   ++ G T
Sbjct: 165 LSQGVVQYT-GDVLFKDLWLRPALAPRDRSLVTVTALIASGQV-AQIPYHLNRAMDNGLT 222

Query: 106 RADVVDLLFISAGLLGFPTAINAVPIVRDILADR 139
           + +V ++L   A  +G+P    A+P+V+ ++  R
Sbjct: 223 KPEVSEMLAHLAFYVGWPNVFTAIPVVKGVVEKR 256



 Score = 44.7 bits (104), Expect = 3e-09
 Identities = 30/105 (28%), Positives = 50/105 (47%), Gaps = 3/105 (2%)

Query: 289 AETSGGSGADVVDSFKDVAPGLGRLIVAHCYGDIFCRPALDPKVRELGAISALAAQGTVA 348
           AE + G+ A      + VAP L R       GD++ RP L  + R +   +AL A+   A
Sbjct: 21  AERASGASAASPGDVRSVAPALERYAQDVLLGDVWKRPGLSARDRGVVTAAALIARNQTA 80

Query: 349 AEKPLGVHIDAALNLGATPEEIVETLFNIIPYAGYPLIEKALLIA 393
               +  + D AL+ G  P E+ E + ++  Y+G+     A+ +A
Sbjct: 81  ---EMAAYFDRALDSGVKPAELSEIITHLAFYSGWGNAMAAVSVA 122