Pairwise Alignments

Query, 328 a.a., LysR family transcriptional regulator from Sinorhizobium meliloti 1021

Subject, 313 a.a., NodD3 nod box-dependent transcriptional activator from Sinorhizobium meliloti 1021

 Score =  123 bits (309), Expect = 5e-33
 Identities = 95/302 (31%), Positives = 142/302 (47%), Gaps = 10/302 (3%)

Query: 21  RSFDLNLLVAFDAMMEEMSVTRAAQRLKIQQPAMSHNISTLRTLFQDELFIRVGQVMKPT 80
           +  DLNLLVA DA+M + SVT AA+ + + QPAMS  I+ LR+ FQDELF   G+ +  T
Sbjct: 4   KGLDLNLLVALDALMTKRSVTAAARSINLSQPAMSSAIARLRSYFQDELFRMQGRELITT 63

Query: 81  ARALNLSGPVRQALRQAQAAVLMADVFDPATEQRTFRLGLSSEVELLLLPDLTARLRDIA 140
            RA  L+  +R AL   Q +++  D+F+PA   R FR+ LS  + L+    +  R+   A
Sbjct: 64  PRAEALAPAIRDALLHIQFSIISWDMFNPAQSDRCFRIILSDFMTLVFFEKVVERVAREA 123

Query: 141 PGIRILARGGDAAEVDAMLDAGVIDLSVGCSYLPDSRHHCEPLYQS---SVLCCFNPQLL 197
           PG+       D    D +L  G +D  +       S H    L+     SV C  N QLL
Sbjct: 124 PGVSFELLPPD-DNPDELLRRGEVDFLIFPDVFMSSVHPKAKLFDQTLVSVGCLTNEQLL 182

Query: 198 EISNPVSLDAYMAAQHAVISQTDSLHGCVKD--ALEHAGAELEVVAAAPDFMSILATARS 255
                +S + YM+  H       +L   V+    LEH G +  +    P F  I      
Sbjct: 183 ---GDLSFERYMSMGHVAAQFGRALKPSVEQWLLLEH-GYKRRIELVVPGFNLIPPLLSG 238

Query: 256 SAVIATVSSRIAARYGPLLGLQVSPVPLALSFPPVAMVWPLHMDSDLGCAWLRQQIREAM 315
           +  IA +  R+A  +   + L++   PL L     A+ WP   + D    W+R+ + +  
Sbjct: 239 TKRIAIIPLRLANHFAKSIPLRIVKHPLPLLSFTEAVQWPALHNKDQASIWMREILLDEA 298

Query: 316 LR 317
            R
Sbjct: 299 AR 300