Pairwise Alignments

Query, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 533 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  147 bits (371), Expect = 9e-40
 Identities = 143/521 (27%), Positives = 224/521 (42%), Gaps = 46/521 (8%)

Query: 1   MKRHLLKGTALAVTMAACSFGATVAFAQEGCVRVLGYESDGEKQTMDPAALI-GTDSVYH 59
           M+R  LK   LA  + AC   A  A         L Y S+      DP+    GTD    
Sbjct: 1   MERIALKPLLLAAGLLACMPLAQAA-------STLVYCSEASPAGFDPSQYTSGTDFDAS 53

Query: 60  IRAVYEPLVD-RSNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGS------DFDAK 112
              V+  L   +    +  P LA SW+ + D   +TFHLR GVKFH         DF+A 
Sbjct: 54  AETVFNRLTQFKRGGTEVEPGLATSWDISQDGLTYTFHLRDGVKFHTTDFFSPTRDFNAD 113

Query: 113 DVVYSYRRLLD---------PAVSPGGFSTLAFLDADGITAIDDHTVRFKVKEP----VV 159
           DV++++ RLLD         P+ SP             +  +DDHTVRF +       V 
Sbjct: 114 DVLFTFNRLLDAQSPFRQAYPSESPYFTDMGLNTTIKSVDKLDDHTVRFNLNNVDASFVQ 173

Query: 160 ELPMLIAT----KYALMVPEGAKSEDLRVKGNGTGPFMQETFTINGAVRVMRRNPTYWRA 215
            L M  A+    +YA  + +  K+E++  K  GTGPF+ + +  +  +R +  N  YW+ 
Sbjct: 174 NLAMSFASVQSAEYAAQLLKQGKAEEINQKPVGTGPFVFKRYQKDSQIRYVA-NKQYWKP 232

Query: 216 GLPKSECLEITTSLEPTSRLSALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLY 275
              K + L    + +  SRL  L +G   +S    PA +  +K +P + +    G    +
Sbjct: 233 EDVKLDNLVFAITPDAASRLQKLKAGECQVSGYPRPADIEVMKQDPNLHVLQQAGFNLGF 292

Query: 276 IAVWTDTPPFDSVKVREAMKLVMDRQKILDTVLLGYGEVGADTPIPPSSPFGLGTPAKTA 335
           +A     PP D +KVR+A+ + +D+  I+  V    G++ A   +PP+  +      K A
Sbjct: 293 LAYNVTHPPLDQLKVRQALDMAIDKPAIIKAVYQSAGQL-AQNALPPAQ-WSYDPTIKDA 350

Query: 336 --DIEKATALLAEAGHPDGIDFDLYTSD----SYPGMMLLAQVYAQMAAPAGIRVNVITS 389
             D  KA ALL EAG   G   +L+       S P   + AQ+  Q     GI+ N+++ 
Sbjct: 351 PYDPTKAKALLKEAGVAPGTTVNLWAMTVQRASNPNARMSAQMIQQDWEKVGIKANIVSY 410

Query: 390 PAEGYWDTIWLKKPAVISYTSARPPAE-----ALTLSLNSKSEWNETHWTRDDFDALVVK 444
               Y       +   + Y       +      +  S  +    N   W    +D LV +
Sbjct: 411 EWGEYIKRAKNGEHDAMIYGWTGDNGDPDNWLGVLYSCAAVKGSNYAKWCNPAYDKLVQQ 470

Query: 445 AGQTADEKQRNDLYRDAQRIVADEGGMILPVFSSVVAGLRK 485
           A  + D +QR   Y+ AQ+I+ ++  +     S+V   LRK
Sbjct: 471 AKVSNDREQRIKWYQQAQKILKEQVPITPIANSTVFQPLRK 511