Pairwise Alignments

Query, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 542 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  134 bits (337), Expect = 8e-36
 Identities = 140/526 (26%), Positives = 235/526 (44%), Gaps = 54/526 (10%)

Query: 5   LLKGTALAVTMAACSFGATVAFAQEGCVRVLGYESDGEKQTMDPAALI-GTDSVYHIRAV 63
           +LK   + + ++A    A   FAQ     V  + S+G     DP     GTD       +
Sbjct: 1   MLKHAVIPLIVSA-GLMAAAPFAQAATNLV--FCSEGSPAGFDPGQYTTGTDFDASAETM 57

Query: 64  YEPLV--DRSNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGS------DFDAKDVV 115
           +  L   +R  T   +P LA SW+ + D   +TFHLR GVKFH  S       F+A DV+
Sbjct: 58  FNRLTQFERGGTAV-IPGLATSWDVSPDGLTYTFHLRDGVKFHTTSYFKPTRTFNADDVL 116

Query: 116 YSYRRLL---DP--AVSPGGFSTLAFLDAD----GITAIDDHTVRFK--------VKEPV 158
           +++ R++   DP     P  F     +  D     I  +D+HTV+F         ++   
Sbjct: 117 FTFNRMINKDDPFRKAYPTEFPYFTDMGMDTNIKNIEKVDEHTVKFTLGTVDAAFIQNLA 176

Query: 159 VELPMLIATKYALMVPEGAKSEDLRVKGNGTGPFMQETFTINGAVRVMRRNPTYWRAGLP 218
           +    + + +YA  + +  K  D+  K  GTGPF+ +++  +  +R    N  YW+    
Sbjct: 177 MSFASIQSAEYAAQLLKEGKPADINQKPIGTGPFVFKSYQKDSNIRYTG-NKDYWKPEDV 235

Query: 219 KSECLEITTSLEPTSRLSALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAV 278
           K + L    + +P+ R+  L      ++L   PA L  L D+  ++L    G    YIA 
Sbjct: 236 KIDNLIFAITTDPSVRIQKLKKNECQITLFPRPADLKALGDDKDLKLPHQAGFNLGYIAY 295

Query: 279 -------WTDTP-PFDSVKVREAMKLVMDRQKILDTVLLGYGEVGADTPIPPSSPFGLGT 330
                   +D P P   ++VR+A+ + +++Q+I+D+V  G G++  +  +PP+  +   T
Sbjct: 296 NVMDKVKGSDQPNPLADLRVRQALDMSVNKQQIIDSVYQGAGQLAVNA-MPPTQ-WSYDT 353

Query: 331 PAKTA--DIEKATALLAEAGHPDGIDFDLYTSDSY----PGMMLLAQVYAQMAAPAGIRV 384
             K A  D EKA +LL EAG  +G +  L+         P   L+A++        G+ V
Sbjct: 354 TIKDAKYDPEKAKSLLKEAGIKEGTEIVLWAMPVQRPYNPNAKLMAEMLQNDWKKIGLNV 413

Query: 385 NVITSPAEGYW---DTIWLKKPAVISYTSARPPAEA---LTLSLNSKSEWNETHWTRDDF 438
             ITS   G +         +  +I ++      +    +    +S S  N + W    F
Sbjct: 414 K-ITSYEWGEYIKRSKGGENQAMIIGWSGDNGDPDNWLNVLFGCDSLSGNNFSKWCDKKF 472

Query: 439 DALVVKAGQTADEKQRNDLYRDAQRIVADEGGMILPVFSSVVAGLR 484
           D +V +A  T+D  +R +LY+ AQ I+ D   M     S+V   +R
Sbjct: 473 DGIVKEAKATSDVAKRTELYKQAQHILKDAVPMTPIAHSTVYQPMR 518