Pairwise Alignments

Query, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 534 a.a., peptide ABC transporter substrate-binding protein from Pseudomonas simiae WCS417

 Score =  142 bits (359), Expect = 2e-38
 Identities = 127/513 (24%), Positives = 218/513 (42%), Gaps = 45/513 (8%)

Query: 6   LKGTALAVTMAACSFGATVAFAQEGCVRVLGYESDGEKQTMDPAALIGTDSVYHIRAVYE 65
           ++ T +   M A S  A          R L + S+G     D A             +Y 
Sbjct: 1   MRHTTVLSAMFATSLLAVATMGHAADKRSLVFCSEGSPAGFDTAQYTTATDNDAAEPLYN 60

Query: 66  PLVD-RSNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGS------DFDAKDVVYSY 118
            LV+        VPALA  W+ + D   +TFHLR+GVKFH         DF+A DV++++
Sbjct: 61  RLVEFEKGETGVVPALATKWDISPDGMTYTFHLREGVKFHSNKEFKPTRDFNADDVLFTF 120

Query: 119 RRLLDP-----AVSPGGFSTLAFLDADG----ITAIDDHTVRFK--------VKEPVVEL 161
            R+LDP        P  F     +  +     +   D HTV           ++   +  
Sbjct: 121 NRMLDPDHPFRKAYPTEFPYFNGMSLNKNIAKVEKTDPHTVVMTLNTVDAAFIQNIAMSF 180

Query: 162 PMLIATKYALMVPEGAKSEDLRVKGNGTGPFMQETFTINGAVRVMRRNPTYWRAGLPKSE 221
             +++ +YA  + +  K  D+  K  GTGPF+ + +  +  +R +  N  YW     K +
Sbjct: 181 AAILSAEYAEQLLKAGKPSDINQKPIGTGPFVFQRYQKDSQIRYVA-NKQYWDPSRVKLD 239

Query: 222 CLEITTSLEPTSRLSALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAVWTD 281
            L    + + + R+  L +G   ++L   PA +  LK +P ++L   PG    YIA    
Sbjct: 240 QLIFAINTDASVRVQKLKAGECQVTLHPRPADVDALKADPNLKLLTKPGFNLGYIAYNVR 299

Query: 282 TPPFDSVKVREAMKLVMDRQKILDTVLLGYGEVGADTPIPPSSPFGLGTPAKTADIEKAT 341
             PFD ++VR+A+ + +++Q IL+ V  G G++  +   P    +         + EKA 
Sbjct: 300 HKPFDQLEVRQALDMAVNKQSILNAVYQGAGQLAVNAMPPTQWSYDDSIKDAAYNPEKAK 359

Query: 342 ALLAEAGHPDGIDFDLYTSDSY----PGMMLLAQVYAQMAAPAGIRVNVITSPAEGYWDT 397
            LL  AG  +G +  L+         P   L+A++     A  G++V +++     Y   
Sbjct: 360 ELLKAAGVKEGTEITLWAMPVQRPYNPNAKLMAEMLQSDWAKIGLKVKIVSYEWGEY--- 416

Query: 398 IWLKKP-------AVISYTSARPPAE---ALTLSLNSKSEWNETHWTRDDFDALVVKAGQ 447
             +K+        ++I +T      +       S ++    N + W    +D L+ +A  
Sbjct: 417 --IKRTKNGEHDVSLIGWTGDNGDPDNWLGTLYSCDAIGGNNYSMWCDPAYDKLIKQAKV 474

Query: 448 TADEKQRNDLYRDAQRIVADEGGMILPVFSSVV 480
             D +QR  LY+ AQ+++  +   I PV  S V
Sbjct: 475 VTDREQRTVLYKQAQQLLKQQ-VPITPVAHSTV 506