Pairwise Alignments

Query, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 538 a.a., peptide-binding periplasmic ABC transporter protein from Sinorhizobium meliloti 1021

 Score =  143 bits (360), Expect = 2e-38
 Identities = 119/406 (29%), Positives = 194/406 (47%), Gaps = 29/406 (7%)

Query: 1   MKRHLLKGTALAVTMAACSFGATVAFAQEGCVRVLGYESDGEKQTMDPAALIGTDSVYHI 60
           M+  LL G   A  M   +    +   ++G    + Y+ D    T+DPA      +   I
Sbjct: 1   MRNLLLAGVCTAALMGNPALADDI---KQGGEMTVTYKDD--VSTLDPAIGYDWQNWSMI 55

Query: 61  RAVYEPLVDR-SNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGSDFDAKDVVYSYR 119
           +++++ L+D    T +  P LAES+E + D   +TF LRKGVKFH+G +  A+DV YS  
Sbjct: 56  KSLFDGLMDYVPGTTELRPDLAESYEISEDGKIFTFKLRKGVKFHNGRELTAQDVKYSIE 115

Query: 120 RLLDPAV-SPGG--FSTLAFL---------DADGITAIDDHTVRFKVKEPVVELPMLIAT 167
           R+++PA  SPG   F+T+  +         +  GIT  D HT+RF++  P      ++A 
Sbjct: 116 RVVNPATQSPGAGFFATIKGVEEASAGKGGELSGITVQDPHTIRFELTRPDATFLHVMAL 175

Query: 168 KYALMVPEGAKSE---DLRVKGNGTGPFMQETFTINGAVRVMRRNPTYWRAGLPKSECLE 224
            +A +VP+    +   D      G+G F    +T+ G   V  R   YW  GLPK + + 
Sbjct: 176 NFAHVVPKEEVEKHGADFGKNPVGSGAFKLAEWTL-GQRLVFERFTDYWNEGLPKLDRIT 234

Query: 225 ITTSLEPTSRLSALLSGTVDL-SLTVDPASLITLKDNPAVELAATPGAT--SLYIAVWTD 281
                EP   L  L +G +D+    + PA  + + ++P  +     G    + Y+ +   
Sbjct: 235 FEVGQEPVVALLRLQNGEIDVPGDGIPPAKFVEVTNDPNFKDLIIRGGQLHTGYVTMNVK 294

Query: 282 TPPFDSVKVREAMKLVMDRQKILDTVLLGYGEVGADTPIPPSSP-FGLGTPAKTADIEKA 340
             PFD V+VR+A+ + +++ +IL   ++    V A+ P+PPS P +         D E A
Sbjct: 295 MAPFDKVEVRKAVNMAINKDRILR--IINGRAVAANQPLPPSMPGYAKDYAGYAYDPEGA 352

Query: 341 TALLAEAGHPDGIDFDLYTSDSYPGMMLLAQVYAQMAAPAGIRVNV 386
             LL +AG  DG   +LY  ++ P    +AQ   Q     GI  ++
Sbjct: 353 KKLLEQAGLGDGFSTELYVMNTDP-QPRIAQAIQQDLKAIGITASI 397