Pairwise Alignments

Query, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 529 a.a., periplasmic binding protein from Sinorhizobium meliloti 1021

 Score =  241 bits (616), Expect = 4e-68
 Identities = 169/501 (33%), Positives = 249/501 (49%), Gaps = 20/501 (3%)

Query: 1   MKRHLLKGTALAVTMAACSFG---ATVAFAQE---GCVRVLGYESDGEKQTMDPAALIGT 54
           M R    G A A+ +AA +     A+ A AQE   G    LG E      + DPA  +  
Sbjct: 17  MNRREFLGRAAALGIAASTANTLFASSAAAQEPKRGGHLKLGLEGAAATDSRDPAKALSQ 76

Query: 55  DSVYHIRAVYEPLVD-RSNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGSDFDAKD 113
                 R   + LV+    T +PVPALAESWE +ADA  WTF +RKGVKFHDG +    D
Sbjct: 77  FMFVVGRNWGDMLVESHPTTGEPVPALAESWEPSADAATWTFTIRKGVKFHDGKELTIDD 136

Query: 114 VVYSYRRLLDPAVSPGGFSTLAFLDADGITAIDDHTVRFKVKEPVVELPMLIATKYALMV 173
           V+ + +R  D     G    +  +    I A  D  V   + E   +LP+L+   + ++ 
Sbjct: 137 VIKTLQRHTDEKSESGALGVMKSIKE--IKADGDKLV-LTLTEGNADLPLLLTDYHLIIQ 193

Query: 174 PEGAKSE-DLRVKGNGTGPFMQETFTINGAVRVMRRNPTYWRAGLPKSECLEITTSLEPT 232
           P G     D  +   GTGP+   +F   G      RN   WR      + +E+    + T
Sbjct: 194 PNGGTDNPDAMI---GTGPYKVASFE-PGVRATFERNADDWRTDRGYVDSVELIAMNDAT 249

Query: 233 SRLSALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAVWTDTPPFDSVKVRE 292
           +R++AL SG V     VDP ++  LK  P VE+  T G       +  +T PFD+  +R 
Sbjct: 250 ARIAALSSGQVHFINRVDPKTVNLLKKAPTVEILNTSGRGHYVFIMHCNTAPFDNNDLRM 309

Query: 293 AMKLVMDRQKILDTVLLGYGEVGADTPIPPS-SPFGLGTPAKTADIEKATALLAEAGHPD 351
           A+K  MDR+ ++  +L GYG+VG D PI  + + F  G   +  D +KA     ++GH  
Sbjct: 310 ALKYAMDRETLVQRILGGYGKVGNDFPINDTYALFPEGIEQRAYDPDKAAFHYKKSGHSG 369

Query: 352 GIDFDLYTSD-SYPGMMLLAQVYAQMAAPAGIRVNVITSPAEGYWDTIWLKKPAVISYTS 410
            +   L TSD ++PG +  A +Y   A  AGI + V   P +GYW  +W  +P   SY  
Sbjct: 370 PV--LLRTSDVAFPGAVDAAVLYQASAKKAGIEIEVKREPGDGYWSNVWNVQPFSTSYWG 427

Query: 411 ARPPAEAL-TLSLNSKSEWNETHWTRDDFDALVVKAGQTADEKQRNDLYRDAQRIVADEG 469
            RP  + + + +  S ++WN+T + R DFD ++++A    DE +R D+YR    +V DEG
Sbjct: 428 GRPTQDQMYSTAYLSTADWNDTRFKRPDFDKILLEARSELDEAKRKDMYRTMAMMVRDEG 487

Query: 470 GMILPVFSSVVAGLRKGCSGY 490
           G+ILP+F+  V    K   GY
Sbjct: 488 GLILPMFNDFVNAAGKTVKGY 508