Pairwise Alignments

Query, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 535 a.a., dipeptide transporter (NCBI) from Escherichia coli BW25113

 Score =  145 bits (367), Expect = 3e-39
 Identities = 135/522 (25%), Positives = 231/522 (44%), Gaps = 57/522 (10%)

Query: 11  LAVTMAACSFGATVAFAQEGCVRVLGYESDGEKQTMDPAALIGTDSVYHIRAV--YEPLV 68
           L +++ A +  A+V        + L Y S+G  +  +P  L  + + Y   +V  Y  LV
Sbjct: 13  LGLSLVAMTVAASVQ------AKTLVYCSEGSPEGFNPQ-LFTSGTTYDASSVPLYNRLV 65

Query: 69  D-RSNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGSDF------DAKDVVYSYRRL 121
           + +  T + +P LAE WE + D   +TFHLRKGVK+HD  +F      +A DVV+S+ R 
Sbjct: 66  EFKIGTTEVIPGLAEKWEVSEDGKTYTFHLRKGVKWHDNKEFKPTRELNADDVVFSFDRQ 125

Query: 122 LDP-----AVSPGGFSTLAFLD----ADGITAIDDHTVRFKVKEP--------VVELPML 164
            +       VS G +     +        +  +DD+TV+F +  P         ++   +
Sbjct: 126 KNAQNPYHKVSGGSYEYFEGMGLPELISEVKKVDDNTVQFVLTRPEAPFLADLAMDFASI 185

Query: 165 IATKYALMVPEGAKSEDLRVKGNGTGPFMQETFTINGAVRVMRRNPTYWRAGLPKSECLE 224
           ++ +YA  + +    E L +   GTGPF  + +  +  +R  +    YW    P+ + L 
Sbjct: 186 LSKEYADAMMKAGTPEKLDLNPIGTGPFQLQQYQKDSRIR-YKAFDGYW-GTKPQIDTLV 243

Query: 225 ITTSLEPTSRLSALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAVWTDTPP 284
            + + + + R + L      +    +PA +  +K + ++ L   PG    Y++      P
Sbjct: 244 FSITPDASVRYAKLQKNECQVMPYPNPADIARMKQDKSINLMEMPGLNVGYLSYNVQKKP 303

Query: 285 FDSVKVREAMKLVMDRQKILDTVLLGYGEVGADTPIPPSSPFGLGTPAK--TADIEKATA 342
            D VKVR+A+   +++  I+  V  G G V A   IPP+  +G     +  T D EKA A
Sbjct: 304 LDDVKVRQALTYAVNKDAIIKAVYQGAG-VSAKNLIPPTM-WGYNDDVQDYTYDPEKAKA 361

Query: 343 LLAEAGHPDGIDFDLYTSDSY----PGMMLLAQVYAQMAAPAGIRVNVIT--------SP 390
           LL EAG   G   DL+         P    +A++     A  G++  ++T          
Sbjct: 362 LLKEAGLEKGFSIDLWAMPVQRPYNPNARRMAEMIQADWAKVGVQAKIVTYEWGEYLKRA 421

Query: 391 AEGYWDTIWLKKPAVISYTSARPPAEALTLSLNSKSEW--NETHWTRDDFDALVVKAGQT 448
            +G   T+ +         +  P     TL   + SE   N + W    F+ L+  A  T
Sbjct: 422 KDGEHQTVMMGWTG----DNGDPDNFFATLFSCAASEQGSNYSKWCYKPFEDLIQPARAT 477

Query: 449 ADEKQRNDLYRDAQRIVADEGGMILPVFSSVVAGLRKGCSGY 490
            D  +R +LY+ AQ ++ D+   ++   S+V   +RK   GY
Sbjct: 478 DDHNKRVELYKQAQVVMHDQAPALIIAHSTVFEPVRKEVKGY 519