Pairwise Alignments

Query, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 535 a.a., Periplasmic dipeptide transport protein from Azospirillum sp. SherDot2

 Score =  227 bits (579), Expect = 7e-64
 Identities = 161/510 (31%), Positives = 248/510 (48%), Gaps = 21/510 (4%)

Query: 1   MKRHLLKGTALA---VTMAACSFGATVAFAQEGCVRVLGYESDGEKQTMDPA-ALIGTDS 56
           MK  L  G +LA   + +            + G ++  G+ S     T+DPA A + TD 
Sbjct: 30  MKMLLAGGVSLAAADLVLGRAGMALAATPVKGGALKAAGWSSS-TADTLDPAKASLSTDY 88

Query: 57  VYHIRAVYEPLVDRSNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGSDFDAKDVVY 116
           V    A Y  L        P   LAES ES  DA  WT  LRKGV FHDG    A DVVY
Sbjct: 89  V-RCCAFYNRLTTLDQNGIPQMELAESVESG-DAKTWTVKLRKGVTFHDGKSLTADDVVY 146

Query: 117 SYRRLLDPAVSPGGFSTLAFLDAD--GITAIDDHTVRFKVKEPVVELPMLIATKYALMVP 174
           S +R LDPAV     S +A + A      A+D  TV   +  P  +LP ++AT + ++V 
Sbjct: 147 SLKRHLDPAVG----SKVAKIAAQMTEFKAVDKTTVEITLASPNADLPTILATHHFMIVA 202

Query: 175 EGAKSEDLRVKGNGTGPFMQETFTINGAVRVMRRNPTYWRAGLPKSECLEITTSLEPTSR 234
           +G        KGNGTG F  ++F   G   +  RN  YW+ G P  +  E     +  +R
Sbjct: 203 DGTTDFS---KGNGTGAFTCKSFE-PGVRSIGLRNQNYWKGG-PNVDSFEFFAISDDNAR 257

Query: 235 LSALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAVWTDTPPFDSVKVREAM 294
           ++ALLSG + L+ +++P S   +       L+ T       + +  D  P       + M
Sbjct: 258 VNALLSGDIHLAASINPRSTRLVDGQKGFALSKTTSGNYTDLNIRLDMEPGSRKDFVDGM 317

Query: 295 KLVMDRQKILDTVLLGYGEVGADTPIPPSSPF-GLGTPAKTADIEKATALLAEAGHPDGI 353
           K +++R++I+ + L G+GEVG D P+ P + +       K  D EKA AL  +AG   G 
Sbjct: 318 KYIVNREQIVKSALRGFGEVGNDQPVSPVNAYHNAALKPKAFDPEKAKALFKKAG-VLGQ 376

Query: 354 DFDLYTSDSYPGMMLLAQVYAQMAAPAGIRVNVITSPAEGYWDTIWLKKPAVISYTSARP 413
              + TSD+    + +A V    AA  G++++V   P++GYW   WLK P      + RP
Sbjct: 377 SIPVITSDAASSAIDMAMVIQASAAEIGMKLDVQRVPSDGYWSNYWLKSPIHFGNINPRP 436

Query: 414 PAEAL-TLSLNSKSEWNETHWTRDDFDALVVKAGQTADEKQRNDLYRDAQRIVADEGGMI 472
             + L +L   S++ WNE+ +  + FD ++++A    D+ +R ++Y D Q ++A+E G I
Sbjct: 437 TPDILFSLLYASEAPWNESKYKSEKFDKMMIEARGMLDQAKRKEIYNDMQVMIAEEAGTI 496

Query: 473 LPVFSSVVAGLRKGCSGYEPNVDVNRIDYA 502
           +P + S +  +     G  P+     + YA
Sbjct: 497 IPAYISNIDAINDKLKGLAPSPLGGMMGYA 526