Pairwise Alignments

Query, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 523 a.a., putative deoxycholate-binding periplasmic protein YgiS from Azospirillum sp. SherDot2

 Score =  268 bits (684), Expect = 5e-76
 Identities = 177/516 (34%), Positives = 254/516 (49%), Gaps = 13/516 (2%)

Query: 2   KRHLLKGTA-LAVTMAACSFGATVAFAQEGCVR---VLGYESDGEKQTMDPAALIGTDSV 57
           +R  L GTA L    A    GA  AFAQ+   R   VL    D     + P         
Sbjct: 6   RRRFLAGTAGLGALPAFNLLGALPAFAQQTAARRGGVLRISVDQAASVIHPLRTRVNPEY 65

Query: 58  YHIRAVYEPLVDRSNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGSDFDAKDVVYS 117
                +Y  L   +  M+  P LAESW  +   TEWTF LR G+ FHDGS   A DVV +
Sbjct: 66  LVAELLYSGLTRLAAGMKVEPDLAESWSPDQTLTEWTFVLRPGLTFHDGSPCTAADVVAT 125

Query: 118 YRRLLDPAVSPGGFSTLAFLDADGITAIDDHTVRFKVKEPVVELPMLIATKYALMVPEGA 177
           +  +LDP  +  G + +  +    +TA D+ TV F++  P  +LP+ +A   A +VP   
Sbjct: 126 FTAILDPKTASPGRTNVGPIKE--VTAKDERTVLFRLTSPYADLPVALAYTNARIVPAKV 183

Query: 178 KSEDLRVKGNG---TGPFMQETFTINGAVRVMRRNPTYWRAGLPKSECLEITTSLEPTSR 234
              DL     G   TGPF   +F  +  + V+ RNP Y+    P  + +E+    + T+ 
Sbjct: 184 IETDLDSLSRGAVGTGPFKLVSFEPDRKI-VVERNPAYYDPARPYLDRVEVLVYPDRTAE 242

Query: 235 LSALLSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAVWTDTPPFDSVKVREAM 294
            SAL+SG +DL L   P     L+    V+    P    L + +  D  PF   +VR+A+
Sbjct: 243 ASALISGDIDLMLGTAPGEYQRLEKAAGVKALRVPSGQFLNVNMGCDQKPFSDPRVRKAL 302

Query: 295 KLVMDRQKILDTVLLGYGEVGADTPIPPSSPFGLGTPAKTADIEKATALLAEAGHPDGID 354
            L +DR+ ++  V  GYG  G DTPI P+  F    P + AD+ +A  LLAEAG+P+G+D
Sbjct: 303 ALSVDREAMVGFVAGGYGTPGNDTPISPAYRFHREQPLRKADLAQAKKLLAEAGYPNGVD 362

Query: 355 FDLYTSDSYPGMMLLAQVYAQMAAPAGIRVNVITSPAEGYWDTIWLKKPAVISYTSARPP 414
             +  SD       LA    +MA PAG R+ V T P   Y D +W K    + + + +  
Sbjct: 363 LTMIASDKPGTRTELAVAIREMAKPAGFRIQVQTMPHATYLDQVWKKGNFYVGFYNMQAT 422

Query: 415 AEAL-TLSLNSKSEWNETHWTRDDFDALVVKAGQTADEKQRNDLYRDAQRIVADEGGMIL 473
           A+A+ +L   S + WNET W   DFDALV +A    DE +R  LY  AQ+++ DE   ++
Sbjct: 423 ADAVFSLLYTSDAAWNETRWNNKDFDALVAEARAKTDETERAALYAKAQQLMHDEVPSVI 482

Query: 474 PVFSSVVAGLRKGCSGYE--PNVDVNRIDYAELTCA 507
           PVF  ++A  R    GY+  P   V R+D+     A
Sbjct: 483 PVFFDLLAARRDYVEGYDLHPRGSVFRLDFVSFGAA 518