Pairwise Alignments

Query, 508 a.a., ABC transporter substrate-binding protein from Sinorhizobium meliloti 1021

Subject, 517 a.a., ABC transporter substrate binding protein (oligopeptide) from Agrobacterium fabrum C58

 Score =  235 bits (600), Expect = 2e-66
 Identities = 152/485 (31%), Positives = 247/485 (50%), Gaps = 13/485 (2%)

Query: 2   KRHLLKGTALAVTMAACSFGATVAFAQEGCVRVLGYESDGEKQTMDPAALIGTDSVYHIR 61
           +R LL G A         FGA  A  + G    +G+       T+DPA       V  + 
Sbjct: 10  RRSLLAGAAGLAAAGIVPFGARAAEPRRGGTLRIGHLGGATSDTIDPATFAAGPVVTAML 69

Query: 62  AVYEPLVDRSNTMQPVPALAESWESNADATEWTFHLRKGVKFHDGSDFDAKDVVYSY--- 118
           AV   LV+     + VP LAES+E++ADA  WTF LR+   F DG    AKDV+ S+   
Sbjct: 70  AVCNNLVEIDAEGKAVPELAESFETDADARIWTFKLRQTATFSDGRKLTAKDVIASFNHH 129

Query: 119 RRLLDPAVSPGGFSTLAFLDADGITAIDDHTVRFKVKEPVVELPMLIATKYALMVPEGAK 178
           R     + + G  S L  + +DG     DH V F++K    +   L +  + +++P    
Sbjct: 130 RGQDSKSGANGSLSQLTDIRSDG-----DHVVIFELKSGNADFAYLTSDYHFVIMPANED 184

Query: 179 SEDLRVKGNGTGPFMQETFTINGAVRVMRRNPTYWRAGLPKSECLEITTSLEPTSRLSAL 238
                    GTG ++   F     + + RR+  YW++     + + ++T  + T+R +AL
Sbjct: 185 GTLNWQSKLGTGGYVLADFEPGVRITLKRRDD-YWKSDRAWFDTVVLSTINDATARQNAL 243

Query: 239 LSGTVDLSLTVDPASLITLKDNPAVELAATPGATSLYIAVWTDTPPFDSVKVREAMKLVM 298
           ++G VD+  + D A+L  L   P ++     G     + ++ D  PF    VR A+K  +
Sbjct: 244 ITGEVDVINSPDLATLPLLLRRPGIKATEVTGTAHYAMPMFCDAAPFKDPNVRLALKHAI 303

Query: 299 DRQKILDTVLLGYGEVGADTPIPPSSP-FGLGTPAKTADIEKATALLAEAGHPDGIDFDL 357
           DR+ +L+ VL G+G +  D+PI P++  F    P    D +KA   L +AG  D +  ++
Sbjct: 304 DRKAVLEKVLHGHGRIANDSPIAPANRYFAADLPQHDYDPDKAKHYLKKAG-MDALKVEI 362

Query: 358 YTSDSYP-GMMLLAQVYAQMAAPAGIRVNVITSPAEGYWDTIWLKKPAVISYTSARPPAE 416
             SD+   G + + Q++ Q A   GI + +   P +GYW  +WLKKP  +SY + RP  +
Sbjct: 363 SASDAASVGALAMVQLFQQSAKATGIDLGIKREPDDGYWSNVWLKKPFCVSYWNGRPTED 422

Query: 417 ALTLSLNSKS-EWNETHWTRDDFDALVVKAGQTADEKQRNDLYRDAQRIVADEGGMILPV 475
            +   + +K  +WNE+HW  + F++L+VKA  T DEK R ++Y + Q +V+++GG I+PV
Sbjct: 423 DMFSLVYAKGVDWNESHWDNERFNSLLVKARTTLDEKLRAEMYHEMQGLVSEDGGTIIPV 482

Query: 476 FSSVV 480
           F + V
Sbjct: 483 FVNYV 487