Pairwise Alignments

Query, 317 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., peptide ABC transporter from Pseudomonas simiae WCS417

 Score =  192 bits (488), Expect = 9e-54
 Identities = 109/313 (34%), Positives = 178/313 (56%), Gaps = 2/313 (0%)

Query: 3   VLRLLASRILFSVLTLLLVSVLIFLILEALPGDVATRILGRDATAKALELLRSQLDLDQP 62
           +LR +  ++  +V TLLL+SV++F ++  +PGD A  +LG  A  ++L  +R  L LD  
Sbjct: 1   MLRFILQKLAMAVPTLLLISVMVFALIRLIPGDPALLMLGDMADPQSLADMRHTLGLDHS 60

Query: 63  ALVRYFQWLGDFLRGDLGVSIATGRPITDVLGPRIVNTLLLSLFAFAIYLVLALVPAIIQ 122
            + ++  W    L  DLG SI+T + +  ++  R   +  + L A     ++A+   +I 
Sbjct: 61  LVTQFLIWFKAVLSFDLGFSISTKQAVLPLILDRFSVSATIVLVAVLFATLIAVPIGLIA 120

Query: 123 ATNRGKAVD-NIISVITLVLLSLPDFLLATILLFLFAVAVPILPALATISEASTWQETLR 181
           A  +  A+D  ++S+ TL LLS+P F L  +LL  F + +  LP +  +S +    + + 
Sbjct: 121 AWKQNSALDLGLVSIATL-LLSIPSFWLGLLLLHAFGIQLGWLPVVGYVSFSQAPWQAMS 179

Query: 182 AMVLPAVTLAIMMAVYAIRVLRDSLIEVLRSDYVRLAELKGLRPTAVLFRHALPNAIVPA 241
            MVLP VTL ++      R+ R S IEVLR +Y+  A  KGL   AVL++HALPNA  P 
Sbjct: 180 YMVLPVVTLTLVEVGAITRMARASTIEVLRLEYIAHARAKGLSERAVLWKHALPNAFAPT 239

Query: 242 LNVTALNFGFLIGGVVIVERVFSYPGFGTLLIDALQLRDIPLIKATVMISAVVYVAANLV 301
             +  L  G L+GG+ ++E VF+ PG G L++DA+  RD P+++  +++   +YV  NL 
Sbjct: 240 WTLVGLILGNLLGGIAVLETVFTLPGIGRLMVDAIFARDYPVLQGCLLLITFIYVLVNLC 299

Query: 302 ADVLAVLLQPRLR 314
            D+L  L  PR++
Sbjct: 300 VDLLYPLFDPRVK 312