Pairwise Alignments

Query, 317 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 315 a.a., ABC transporter permease from Pseudomonas simiae WCS417

 Score =  199 bits (505), Expect = 9e-56
 Identities = 112/310 (36%), Positives = 180/310 (58%), Gaps = 3/310 (0%)

Query: 5   RLLASRILFSVLTLLLVSVLIFLILEALPGDVATRILGRDATAKALELLRSQLDLDQPAL 64
           R +  R L  +  L  +S++ F+++ ++PGD A  +LG  +T  AL  +R+Q  LDQP  
Sbjct: 7   RFVLYRPLQLLPVLFGISLITFVLVRSIPGDPARALLGSRSTPDALLKIRAQYGLDQPLW 66

Query: 65  VRYFQWLGDFLRGDLGVSIATGRPITDVLGPRIVNTLLLSLFAFAIYLVLALVPAIIQAT 124
           ++YF +L + L+GDLG S+        ++  RI  TL+L L +  + L++A+  A   A 
Sbjct: 67  LQYFYFLKNLLKGDLGQSLLYKVDALKLIVTRIEPTLVLVLGSVVLALLIAVPLATFAAR 126

Query: 125 NRGKAVDNIISVITLVLLSLPDFLLATILLFLFAVAVPILPALATISEASTWQETLRAMV 184
           N+G   DN+I V T V L +P F L  +L+ L +V   + P         TW +    MV
Sbjct: 127 NKGGWADNLIRVFTTVGLGMPAFWLGLMLILLLSVQWGLFPVSGY---GRTWLDKAHHMV 183

Query: 185 LPAVTLAIMMAVYAIRVLRDSLIEVLRSDYVRLAELKGLRPTAVLFRHALPNAIVPALNV 244
           LP +T+A+ ++   +R LR S++  L++D+V  A  +GL   AV  RH LPN++VPA+N+
Sbjct: 184 LPCLTIALALSAVLVRNLRASMLMELQADHVTAARARGLLEAAVFRRHVLPNSLVPAVNL 243

Query: 245 TALNFGFLIGGVVIVERVFSYPGFGTLLIDALQLRDIPLIKATVMISAVVYVAANLVADV 304
            A+N G+LI G V++E +F+ PG G LL+  +  RD  +++   M+ A   V  N +ADV
Sbjct: 244 LAVNIGWLISGTVVIESLFAIPGIGQLLVRGIFTRDYMVVQGVAMVLACATVIVNFIADV 303

Query: 305 LAVLLQPRLR 314
           + V L PR++
Sbjct: 304 VTVALDPRVK 313