Pairwise Alignments

Query, 317 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 313 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  192 bits (487), Expect = 1e-53
 Identities = 110/312 (35%), Positives = 171/312 (54%)

Query: 3   VLRLLASRILFSVLTLLLVSVLIFLILEALPGDVATRILGRDATAKALELLRSQLDLDQP 62
           +L  L  R+L ++  LL+V+V IF+I+   PGD A  I G  AT + L+ +R QL L +P
Sbjct: 1   MLTFLGKRLLATLPVLLVVAVAIFMIVRLTPGDPAAVIGGNSATNEDLDRIRVQLGLTRP 60

Query: 63  ALVRYFQWLGDFLRGDLGVSIATGRPITDVLGPRIVNTLLLSLFAFAIYLVLALVPAIIQ 122
              ++  W    L GDLG S    +P+T+++G R+  TL L+     + + +AL    + 
Sbjct: 61  LWEQFAIWCNGVLHGDLGFSFFLNKPVTELIGQRMEPTLSLAGGTLLLAVAIALPLGTLA 120

Query: 123 ATNRGKAVDNIISVITLVLLSLPDFLLATILLFLFAVAVPILPALATISEASTWQETLRA 182
           A   G  +D  +   ++   S+P F++  +L++L A+ +   P       A      L  
Sbjct: 121 AWRMGGWLDKAVMAFSVAGFSVPVFVVGYVLIYLLAMKLQWFPVQGYRRIADGVGPWLHQ 180

Query: 183 MVLPAVTLAIMMAVYAIRVLRDSLIEVLRSDYVRLAELKGLRPTAVLFRHALPNAIVPAL 242
           +VLP +TLAI       RV R ++ E L  D++R A  KG+    VL  HAL NA VP +
Sbjct: 181 LVLPCLTLAITYVALLSRVTRAAVSEALTEDFIRTARAKGITELEVLKHHALRNAAVPVV 240

Query: 243 NVTALNFGFLIGGVVIVERVFSYPGFGTLLIDALQLRDIPLIKATVMISAVVYVAANLVA 302
            V  ++   L+GGVV+ E VF+ PG G L +DA+  RD P+++  V+  AVVYVA NL+ 
Sbjct: 241 TVIGVSAALLLGGVVVTETVFAIPGLGQLTVDAVLNRDFPVLQGVVLFFAVVYVAVNLLV 300

Query: 303 DVLAVLLQPRLR 314
           D+  + + PR+R
Sbjct: 301 DLSYLFIDPRIR 312