Pairwise Alignments

Query, 317 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 316 a.a., ABC transporter, permease protein 1 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  203 bits (517), Expect = 4e-57
 Identities = 107/310 (34%), Positives = 181/310 (58%)

Query: 7   LASRILFSVLTLLLVSVLIFLILEALPGDVATRILGRDATAKALELLRSQLDLDQPALVR 66
           L  R+   + TL+  SV++FL+LE LPG+ A  ++G DA+ +A+  L ++L LDQPA  R
Sbjct: 5   LFKRLATLIGTLIGASVIVFLVLEILPGNAAQMLMGPDASPEAVAALATKLGLDQPAWTR 64

Query: 67  YFQWLGDFLRGDLGVSIATGRPITDVLGPRIVNTLLLSLFAFAIYLVLALVPAIIQATNR 126
           Y+ W+G  L G+LG S A   P+ D++  R+  T+ L+L A     V+AL+  +  A   
Sbjct: 65  YWHWIGGLLTGNLGDSYAYSSPVLDLILERLALTMPLALLAMFFTTVIALLVGVTAAARH 124

Query: 127 GKAVDNIISVITLVLLSLPDFLLATILLFLFAVAVPILPALATISEASTWQETLRAMVLP 186
            K  D  +  +  V +++P+F  A +L+ +F+V +    A         +   +++++LP
Sbjct: 125 NKLGDVGLMGMAQVGIAIPNFWFAILLILVFSVKLQWFSAGGFEGWGDGFFSGIKSLLLP 184

Query: 187 AVTLAIMMAVYAIRVLRDSLIEVLRSDYVRLAELKGLRPTAVLFRHALPNAIVPALNVTA 246
           A++LA++ A    R+ R +++EV+R D+VR A  KG+    VL+ H L NA++P + V  
Sbjct: 185 ALSLAVVQAAILARITRSAVLEVMREDFVRTARAKGVSQRMVLWTHVLRNAMIPVITVMG 244

Query: 247 LNFGFLIGGVVIVERVFSYPGFGTLLIDALQLRDIPLIKATVMISAVVYVAANLVADVLA 306
           + F  L+ G ++VE VF  PG G L+  A+  RD+ +++  VM+ A + V  N V DVL 
Sbjct: 245 MQFSELLAGTIVVENVFYLPGLGRLIFQAISNRDLIVVRNCVMLLAAMVVIVNFVVDVLY 304

Query: 307 VLLQPRLRTS 316
            ++ PR++ S
Sbjct: 305 AVIDPRIKAS 314