Pairwise Alignments

Query, 317 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 326 a.a., Dipeptide transport system permease protein DppB from Azospirillum sp. SherDot2

 Score =  174 bits (442), Expect = 2e-48
 Identities = 105/322 (32%), Positives = 180/322 (55%), Gaps = 10/322 (3%)

Query: 5   RLLASRILFSVLTLLLVSVLIFLILEALPGDVATRILGRDATA--KALELLRSQLDLDQP 62
           +L ASR++ +   L+ + V+ F ++ A PGD A  + G    A  K +  LR Q  LD+P
Sbjct: 6   QLFASRLVKAAAILIAIVVMNFFLVHAAPGDPAMVMAGEAGAADEKFVTQLREQFGLDRP 65

Query: 63  ALVRYFQWLGDFLRGDLGVSIATGRPITDVLGPRIVNTLLLSLFAFAIYLVLALVPAIIQ 122
              +   ++G  ++GDLG S    RP+ D+L  R+  TL+L+L AF + L   +    + 
Sbjct: 66  LYEQLGTYIGKVVQGDLGFSYRQQRPVWDILAERLPATLVLTLTAFILALAAGVALGTLA 125

Query: 123 ATNRGKAVDNIISVITLVLLSLPDFLLATILLFLFAVAVPILPALA--TISEASTW---- 176
           A   G   D+ I+VI L+  + P + +  +L  LF++ +  LPA    TI    T     
Sbjct: 126 AVTVGTWADSAITVIALLAYATPIYWIGLMLSLLFSIQLGWLPAFGYETIGAGYTGLAHV 185

Query: 177 QETLRAMVLPAVTLAIM-MAVYAIRVLRDSLIEVLRSDYVRLAELKGLRPTAVLFRHALP 235
            +    ++LP +TLA+  MA YA R+ R S++EV   D+V+ A+ KGL    ++ RH L 
Sbjct: 186 ADVAVHLILPVITLALFYMAGYA-RLTRASMLEVRSLDFVKTAKAKGLTQGRIVTRHVLR 244

Query: 236 NAIVPALNVTALNFGFLIGGVVIVERVFSYPGFGTLLIDALQLRDIPLIKATVMISAVVY 295
           NAI+P + V  +  G L+GG +++E VF++PG G L  +A+  RD  ++    ++++++ 
Sbjct: 245 NAILPVITVAGIQAGQLVGGSILIETVFAWPGIGRLAFEAVLQRDYQVLLGIFLVTSIMV 304

Query: 296 VAANLVADVLAVLLQPRLRTSR 317
           +  N++ D+L  L+ PR++ S+
Sbjct: 305 ILFNILTDILYGLVDPRIQVSQ 326