Pairwise Alignments

Query, 317 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 333 a.a., ABC transporter, membrane spanning protein (peptide) from Agrobacterium fabrum C58

 Score =  176 bits (447), Expect = 5e-49
 Identities = 104/318 (32%), Positives = 175/318 (55%), Gaps = 10/318 (3%)

Query: 5   RLLASRILFSVLTLLLVSVLIFLILEALPGDVATRILGRD--ATAKALELLRSQLDLDQP 62
           R L   ++ +V T+ ++  L F +L+  PGD A  +      AT + +  +R    LD P
Sbjct: 14  RSLLRNLIQAVPTMFVIVTLGFFVLQLAPGDAADYMAAESGAATQETVADIRRAFGLDLP 73

Query: 63  ALVRYFQWLGDFLRGDLGVSIATGRPITDVLGPRIVNTLLLSLFAFAIYLVLALVPAIIQ 122
            L +   +        LG+S   G P+ D++  R+  TL L + A  I L++ +    I 
Sbjct: 74  LLDQLANYYTSLAHFSLGISPRYGVPVADLIMERLPGTLTLMVLAIVIALLVGIAAGTIM 133

Query: 123 ATNRGKAVDNIISVITLVLLSLPDFLLATILLFLFAVAVPILPA--LATISEAST---WQ 177
           A N  +A D I+SV +L+  S+P F +  I + +F+V +  LPA  + TI  +S    W 
Sbjct: 134 ALNATRAADRILSVASLLFYSVPTFWIGLIFIIVFSVKLGWLPAGGMKTIGASSGGFGWL 193

Query: 178 -ETLRAMVLPAVTLAIM-MAVYAIRVLRDSLIEVLRSDYVRLAELKGLRPTAVLFRHALP 235
            + +   +LPA +LA+  MA+YA R+ R S++EV+  D+VR A+ KGL P  V+ RH L 
Sbjct: 194 IDRVSYALLPATSLALYYMAIYA-RLTRSSILEVIGQDHVRTAKAKGLAPRQVVLRHVLR 252

Query: 236 NAIVPALNVTALNFGFLIGGVVIVERVFSYPGFGTLLIDALQLRDIPLIKATVMISAVVY 295
           NA++P   V  ++   ++GG +++E VFS+PG G L  DA+  R+  L+   +++S+V+ 
Sbjct: 253 NALIPITTVAGIHVAGILGGAIVIETVFSWPGMGRLAFDAVMAREYTLLLGIMLVSSVLV 312

Query: 296 VAANLVADVLAVLLQPRL 313
           +  N + D++   L PR+
Sbjct: 313 ICVNAIVDIIQAALDPRI 330