Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 303 a.a., peptide transporter from Pseudomonas simiae WCS417

 Score =  146 bits (368), Expect = 6e-40
 Identities = 77/223 (34%), Positives = 123/223 (55%), Gaps = 4/223 (1%)

Query: 61  LSGASWQHPMGLDQIGRDVFSRFMHGAHIVLMLSFAGTMLGMVAGTTLGLLSGYIGGWFD 120
           L G   Q  +G D++GRD+ SR + G+ + L++  +  ++ ++ G  LGL +G+      
Sbjct: 73  LEGGQMQFLLGTDELGRDLLSRLIQGSRLSLLIGLSSVVMSLIPGILLGLFAGFFPRLLG 132

Query: 121 EVTQRIVEAMISIPFLALALVMIIAAGPALAGKPVLIVFVVGLVYAPRIVRIARAAAMDI 180
               R+++ M+++P L LA+ ++   GP L    +  V  + +V  P  VR+ RAA M  
Sbjct: 133 PTIMRLMDIMLALPSLLLAVAIVAILGPGL----INTVIAIAIVSLPSYVRLTRAAVMGE 188

Query: 181 ATREYVAVAELRGEGTWSIVFREILPNAANVLLVEFSLRLSYAPILIGALGFLGFGIRPP 240
             R+YV  A L G G   ++F  +LPN    L+V+ +L  S A +   ALGFLG G++PP
Sbjct: 189 LNRDYVTAARLAGAGLPRLMFITVLPNCMAPLIVQATLSFSSAILDAAALGFLGLGVQPP 248

Query: 241 TPEWGLMISENRNLLIASPVTVFGPGLGLASLVIGFNLFTDGL 283
           TPEWG M++  R+ +  +   V  PGL +   V+  NL  DGL
Sbjct: 249 TPEWGTMLASARDYIERAWWVVSLPGLTILLSVLAINLMGDGL 291