Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 301 a.a., Dipeptide ABC transporter, permease protein DppC (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  172 bits (436), Expect = 8e-48
 Identities = 99/281 (35%), Positives = 153/281 (54%), Gaps = 23/281 (8%)

Query: 22  ATPGPFK-------------VGAVILVAHALFAILGVFWTPYGFAEMGAGLPLSGASWQ- 67
           A PGP +             +G V ++   L A+   +  P+   E  + + L   +WQ 
Sbjct: 15  APPGPLREFWAAFSANRGAVIGLVTIILLMLVAMFAPWIAPHAPNETNSAVFLQPPAWQQ 74

Query: 68  -----HPMGLDQIGRDVFSRFMHGAHIVLMLSFAGTMLGMVAGTTLGLLSGYIGGWFDEV 122
                + +G D IGRD+ SR M+GA + L +  A   L +V G  LGL++G+  G  +  
Sbjct: 75  GGSTSYLLGTDAIGRDILSRLMYGARLSLSIGVAVVALSVVVGVVLGLIAGFFRGVLEIA 134

Query: 123 TQRIVEAMISIPFLALALVMIIAAGPALAGKPVLIVFVVGLVYAPRIVRIARAAAMDIAT 182
             R+++ ++++P L LA+V++   GP L    V  +  V +V  P  VRI RAA +   +
Sbjct: 135 IMRLMDIVLTLPSLLLAIVIVAILGPGL----VNAMLAVAIVVLPHYVRITRAAVIAEVS 190

Query: 183 REYVAVAELRGEGTWSIVFREILPNAANVLLVEFSLRLSYAPILIGALGFLGFGIRPPTP 242
           R+YV  A + G GT  ++FRE+LPN A  L+V+ SL +S A +   ALGFLG G +PP+P
Sbjct: 191 RDYVTAARVSGAGTLRLMFREVLPNCAAPLIVQASLGISTAILDAAALGFLGLGAQPPSP 250

Query: 243 EWGLMISENRNLLIASPVTVFGPGLGLASLVIGFNLFTDGL 283
           EWG M+++ R  ++ +   V  PGL +   V+ FNL  DGL
Sbjct: 251 EWGTMLADAREFVLRAWWVVTFPGLAILMAVLAFNLLGDGL 291