Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 293 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  165 bits (418), Expect = 1e-45
 Identities = 87/264 (32%), Positives = 140/264 (53%), Gaps = 4/264 (1%)

Query: 27  FKVGAVILVAHALFAILGVFWTPYGFAEMGAGLPLSGASWQHPMGLDQIGRDVFSRFMHG 86
           F +G V+     + A++   WTP+    M     +   +  H +G D  GRDV S  + G
Sbjct: 29  FVIGGVLAALLLIAALVSFVWTPWSPYAMDMANKMQAPTGSHWLGTDAFGRDVASLLLVG 88

Query: 87  AHIVLMLSFAGTMLGMVAGTTLGLLSGYIGGWFDEVTQRIVEAMISIPFLALALVMIIAA 146
           A   +++      +G+V GT LGLL+    GW +E   R+ +  ++ P +  A++M    
Sbjct: 89  ARASILVGIIAVGIGLVVGTALGLLAAAKRGWVEEAVMRLSDFTLAFPAILSAIMMTAVF 148

Query: 147 GPALAGKPVLIVFVVGLVYAPRIVRIARAAAMDIATREYVAVAELRGEGTWSIVFREILP 206
           G  +    V  +  +G+   P   RI RA+A  I +REYVA A   G+G+++I  + +LP
Sbjct: 149 GAGI----VNAIVAIGIYNIPTFARITRASANAIWSREYVAAARACGKGSFAITMQHVLP 204

Query: 207 NAANVLLVEFSLRLSYAPILIGALGFLGFGIRPPTPEWGLMISENRNLLIASPVTVFGPG 266
           N + VL+V+ ++R + A +   AL +LG G +PP P WG M+SE + L+   P+    PG
Sbjct: 205 NISAVLIVQITIRFAIAILAEAALSYLGLGTQPPQPSWGRMLSEAQTLMFQQPLLAVFPG 264

Query: 267 LGLASLVIGFNLFTDGLSRMLGQR 290
           + +A  V+G NL  DGL  +L  R
Sbjct: 265 MAIALAVLGLNLLGDGLRDLLDPR 288