Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 271 a.a., ABC transporter, permease protein 2 (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  159 bits (402), Expect = 7e-44
 Identities = 90/262 (34%), Positives = 134/262 (51%), Gaps = 4/262 (1%)

Query: 29  VGAVILVAHALFAILGVFWTPYGFAEMGAGLPLSGASWQHPMGLDQIGRDVFSRFMHGAH 88
           +G  IL A AL A +G+FWTP+    +G    L+     H +G D+ GRDV SR M  A 
Sbjct: 10  IGGTILGAIALAAGIGLFWTPFDPVTLGYAKRLAAPDAVHWLGTDEFGRDVLSRLMTAAA 69

Query: 89  IVLMLSFAGTMLGMVAGTTLGLLSGYIGGWFDEVTQRIVEAMISIPFLALALVMIIAAGP 148
               +S       ++ GT +G+LSGY+ GW D V     +A+++ P + LAL  +  AG 
Sbjct: 70  TSARISVLTVATAVLLGTLVGVLSGYLRGWTDRVLMAFNDALLAFPGILLALGFLAVAGA 129

Query: 149 ALAGKPVLIVFVVGLVYAPRIVRIARAAAMDIATREYVAVAELRGEGTWSIVFREILPNA 208
              G    IV  +G+ YAP + RI R   M +   +Y+A + L G   + IV+R +LPN 
Sbjct: 130 NEYG----IVVALGIAYAPSVARIVRGTVMSLREMDYIAASRLMGNSEFFIVWRHVLPNC 185

Query: 209 ANVLLVEFSLRLSYAPILIGALGFLGFGIRPPTPEWGLMISENRNLLIASPVTVFGPGLG 268
              L+V  +    +A +   AL FLG G+ PP P WG M++ +R  +  +      PG  
Sbjct: 186 VAPLVVLATSMFGWALLAESALSFLGLGVPPPAPTWGNMLAGSRPFIAKAVWLAIFPGAC 245

Query: 269 LASLVIGFNLFTDGLSRMLGQR 290
           ++  ++G NL  D L   L  R
Sbjct: 246 ISLTLLGINLLGDALRDRLDPR 267