Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 298 a.a., D,D-dipeptide ABC transporter permease from Escherichia coli ECRC62

 Score =  144 bits (363), Expect = 2e-39
 Identities = 94/296 (31%), Positives = 146/296 (49%), Gaps = 15/296 (5%)

Query: 5   TTIPARRFSRFNAER--WRATPGPFKV-GAVILVAHALFAILGVFWT---PYGFAEMGAG 58
           + +  ++ +RFN  +  W     P  V GAVI+V   L  I   +     P         
Sbjct: 8   SAVRPQKQTRFNGAKLVWMLKGSPLTVTGAVIIVLMLLMMIFSPWLATHDPNAIDLTARL 67

Query: 59  LPLSGASWQHPMGLDQIGRDVFSRFMHGAHIVLMLSFAGTMLGMVAGTTLGLLSGYIGGW 118
           LP S A W    G D++GRD+FSR + G+   ++       +  + G+ LG LSG +GG 
Sbjct: 68  LPPSAAHW---FGTDEVGRDLFSRVLVGSQQSILAGLVVVAIAGMIGSLLGCLSGVLGGR 124

Query: 119 FDEVTQRIVEAMISIPFLALALVMIIAAGPALAGKPVLIVFVVGLVYAPRIVRIARAAAM 178
            D +  RI++ M+SIP L L + +  A GP+L       +  + +V  P  VR+AR  A+
Sbjct: 125 ADAIIMRIMDIMLSIPSLVLTMALAAALGPSLFNA----MLAIAIVRIPFYVRLARGQAL 180

Query: 179 DIATREYVAVAELRGEGTWSIVFREILPNAANVLLVEFSLRLSYAPILIGALGFLGFGIR 238
            +    YV  A+  G   W ++   IL N+   L+V+ SL +  A ++   LGF+G G +
Sbjct: 181 VVRQYTYVQAAKTFGASRWHLINWHILRNSLPPLIVQASLDIGSAILMAATLGFIGLGAQ 240

Query: 239 PPTPEWGLMISENRNLLIASPVTVFGPGLGLASLVIGFNLFTDGLSRMLGQRPVAG 294
            P+ EWG M++  RN ++        PG  +    +GFNLF DG+  +L   P AG
Sbjct: 241 QPSAEWGAMVANGRNYVLDQWWYCAFPGAAILLTAVGFNLFGDGIRDLLD--PKAG 294