Pairwise Alignments

Query, 295 a.a., ABC transporter permease from Sinorhizobium meliloti 1021

Subject, 272 a.a., oligopeptide ABC transporter permease from Agrobacterium fabrum C58

 Score =  160 bits (404), Expect = 4e-44
 Identities = 87/262 (33%), Positives = 133/262 (50%), Gaps = 4/262 (1%)

Query: 29  VGAVILVAHALFAILGVFWTPYGFAEMGAGLPLSGASWQHPMGLDQIGRDVFSRFMHGAH 88
           +G +++    + AI G+FWTPY   ++G    L+     H +G D+ GRDV SR M GA 
Sbjct: 10  IGGILIALLLITAITGLFWTPYDPMKLGFASRLAAPGAGHLLGTDEFGRDVLSRLMVGAR 69

Query: 89  IVLMLSFAGTMLGMVAGTTLGLLSGYIGGWFDEVTQRIVEAMISIPFLALALVMIIAAGP 148
             + + F       + GT +GL+SGY  GW D V   I  A+++ P + LAL ++   G 
Sbjct: 70  ASVWIGFLTVSFATICGTLIGLVSGYARGWVDGVIMAINNALLAFPGILLALGLLAVFGA 129

Query: 149 ALAGKPVLIVFVVGLVYAPRIVRIARAAAMDIATREYVAVAELRGEGTWSIVFREILPNA 208
              G    I+F +G+ Y P + R+ R A + +  RE++  + + G G    +FR ILPN 
Sbjct: 130 NQYG----IIFALGIAYTPSMARVVRGAVLSLREREFIEASLVMGNGEIYTMFRHILPNC 185

Query: 209 ANVLLVEFSLRLSYAPILIGALGFLGFGIRPPTPEWGLMISENRNLLIASPVTVFGPGLG 268
              + V  +    +A +   AL FLG G+ PP P WG M++  R  +  +      PGL 
Sbjct: 186 IAPITVLATSMFGWAILSESALSFLGLGVPPPAPTWGNMLAAGRPFIQQAVWLGLFPGLC 245

Query: 269 LASLVIGFNLFTDGLSRMLGQR 290
           +A  ++G NL  D L   L  R
Sbjct: 246 IALTLLGINLLGDALRDRLDPR 267