Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 342 a.a., Dipeptide ABC transporter, ATP-binding protein DppD (TC 3.A.1.5.2) from Variovorax sp. SCN45

 Score =  224 bits (570), Expect = 6e-63
 Identities = 121/305 (39%), Positives = 177/305 (58%), Gaps = 6/305 (1%)

Query: 4   LIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINSL 63
           L+++++L++ +    G  + V  VS  +  GE  G+VGESG GKS     L+G       
Sbjct: 3   LLDIKDLHVEFPTQGGVLHAVDGVSLTLEEGEVLGIVGESGSGKSVTMMALMGLVGFPGR 62

Query: 64  VQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKAL 123
           V+   + F G +LL +   +   L G  +A + Q PTTSL+P   +G Q+ E +  H  L
Sbjct: 63  VRAEHMRFAGKELLGISDKARRSLVGKEVAMIFQEPTTSLNPCFTIGFQLMETLRLHLKL 122

Query: 124 PDGMTMERRIVELFTLVGLPDVGHR---YPHELSGGQQQRVTIAMAVACNPDLLVLDEPT 180
            D    +RR  EL   VG+P    R   YPH+LSGG  QRV IAMA+ACNP LL+ DEPT
Sbjct: 123 -DKREAKRRATELLEQVGIPAASSRLGSYPHQLSGGMNQRVMIAMAIACNPRLLIADEPT 181

Query: 181 TGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDKL 240
           T LDVT Q QI+ LL DL+   GMA++ +TH++ +++++A R+ VMYAGQ++E    D L
Sbjct: 182 TALDVTIQAQILDLLRDLQKERGMALVLITHNMGVVSEMAQRIAVMYAGQVMEHQRVDHL 241

Query: 241 LSAPAHPYSRGLIASIPTNDGTDRQARSLRGMLRR-DEMSTGCKFEPRCDFAT-GACRAT 298
            ++P HPY+  L+A++P     + +  ++ GM+    +   GC F PRC + T  AC   
Sbjct: 242 FASPQHPYTEALLAALPERVAPEGRLATISGMVPGVHDRPAGCLFAPRCSYVTERACHVR 301

Query: 299 PQLLE 303
           P L E
Sbjct: 302 PALRE 306



 Score = 41.6 bits (96), Expect = 5e-08
 Identities = 29/80 (36%), Positives = 42/80 (52%), Gaps = 7/80 (8%)

Query: 373 INLNLAAGEVVALVGGSGSGKSTIARAISARL----PPRAGIIRLDGTALAPSLKDRSVE 428
           ++L L  GEV+ +VG SGSGKS    A+   +      RA  +R  G  L   + D++  
Sbjct: 26  VSLTLEEGEVLGIVGESGSGKSVTMMALMGLVGFPGRVRAEHMRFAGKELL-GISDKARR 84

Query: 429 EL--RQIQYIFQNPDASLNP 446
            L  +++  IFQ P  SLNP
Sbjct: 85  SLVGKEVAMIFQEPTTSLNP 104