Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 329 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  225 bits (574), Expect = 2e-63
 Identities = 123/327 (37%), Positives = 188/327 (57%), Gaps = 9/327 (2%)

Query: 4   LIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINSL 63
           L++V++L+I      G    V+ + F +  GE  G+VGESGCGKS     L+G     + 
Sbjct: 3   LLQVKDLHIELQTQRGPAEAVRGIDFTLERGETLGIVGESGCGKSITVMSLMGLLPSTAK 62

Query: 64  VQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKAL 123
           V TG + FDGT+L+  D   + ++RGNRI  + Q P T+L+P   +  Q+ E +  H+ L
Sbjct: 63  V-TGSIRFDGTELVGRDEKDMCQIRGNRIGMIFQEPMTALNPVHTIARQVGEPLRLHRGL 121

Query: 124 PDGMTMERRIVELFTLVGLPDVGHR---YPHELSGGQQQRVTIAMAVACNPDLLVLDEPT 180
                  + ++ L   VG+PD   R   YPH+ SGGQ+QR+ IAMA+AC PDLL+ DEPT
Sbjct: 122 SKA-DARKEVLALLERVGIPDAASRLDAYPHQFSGGQRQRIGIAMALACGPDLLIADEPT 180

Query: 181 TGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDKL 240
           T LDVT Q+QI++L+  L +  GMA++ ++HDL ++AQ   ++ VMY G +VE  P + +
Sbjct: 181 TALDVTIQKQILELIQSLVAERGMALILISHDLGVIAQTVSKMLVMYGGSVVESGPTEAV 240

Query: 241 LSAPAHPYSRGLIASIPTNDGTDRQAR--SLRGML-RRDEMSTGCKFEPRCDFATGACRA 297
            +  AHPY++GL A+ P   G  R  R  +++G +    ++  GC F  RC +   AC  
Sbjct: 241 FARRAHPYTQGLFAARPA-IGAPRGLRLATIKGSVPELVDLPKGCPFAGRCSYTVDACHT 299

Query: 298 TPQLLELIEDARSVACMRWREATAPLA 324
           T     ++    +V C+R  E    +A
Sbjct: 300 TRPPATMLPHDHAVRCIRLEEIATEVA 326



 Score = 47.8 bits (112), Expect = 7e-10
 Identities = 39/109 (35%), Positives = 48/109 (44%), Gaps = 12/109 (11%)

Query: 342 LLSVTELSLSYQQPGLFNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIARAIS 401
           LL V +L +  Q          R     VR I+  L  GE + +VG SG GKS    ++ 
Sbjct: 3   LLQVKDLHIELQTQ--------RGPAEAVRGIDFTLERGETLGIVGESGCGKSITVMSLM 54

Query: 402 ARLPPRA---GIIRLDGTAL-APSLKDRSVEELRQIQYIFQNPDASLNP 446
             LP  A   G IR DGT L     KD       +I  IFQ P  +LNP
Sbjct: 55  GLLPSTAKVTGSIRFDGTELVGRDEKDMCQIRGNRIGMIFQEPMTALNP 103