Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 688 a.a., ABC transporter, ATP-binding protein (cluster 5, nickel/peptides/opines) from Variovorax sp. SCN45

 Score =  274 bits (700), Expect = 1e-77
 Identities = 174/463 (37%), Positives = 251/463 (54%), Gaps = 22/463 (4%)

Query: 5   IEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINSLV 64
           +EVRNL   +   +G   VV  VSF +  G+  GLVGESG GKS   + ++G       V
Sbjct: 14  LEVRNLQTRFHTRAGVLPVVDGVSFTLGRGKVLGLVGESGSGKSVTGFSIMGLVDPPGKV 73

Query: 65  QTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKALP 124
           + G+VLF G +L +L A     LRGNRIA + Q+P  +L+P +RV +Q+ E +  HK + 
Sbjct: 74  EGGQVLFQGRELTQLPAIERRELRGNRIAMIFQDPMATLNPVLRVDTQMIEAVKAHKRVS 133

Query: 125 DGMTMERRIVELFTLVGLPDVGHR---YPHELSGGQQQRVTIAMAVACNPDLLVLDEPTT 181
                 R   +   L+G+P    R   YPH+LSGG +QRV IA+A+   PDL++ DEPTT
Sbjct: 134 TEEA-RRHARDTLGLMGIPSPEERLRAYPHQLSGGMRQRVAIAIAMLHGPDLIIADEPTT 192

Query: 182 GLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDKLL 241
            LDVT Q QI+  +  L    G ++++++HDL+++A +AD + VMYAG++VE      +L
Sbjct: 193 ALDVTIQAQILSEVQKLVRETGTSLIWISHDLSVVASLADEIAVMYAGRIVEHGTVADVL 252

Query: 242 SAPAHPYSRGLIASIPTNDGTDRQARSLRGML-RRDEMSTGCKFEPRCDFATGAC-RATP 299
             P HPY+RGLI S+P+ +    + R ++GM     +M  GC F PRC  A  AC +  P
Sbjct: 253 DHPQHPYTRGLIDSLPSANERGARLRQIQGMTPSLLKMPAGCAFAPRCPHADAACEQQRP 312

Query: 300 QLLELIEDA--RSVACMR-WREATAPLAPSVTAKAVARTAVRSE-----SLLSVTELSLS 351
           ++     DA    V C    R+   P  P+    A AR A + +      L  V +   +
Sbjct: 313 EVSRPRHDAPWHEVRCFHPQRDKPVPAVPA-APPAAARVAAQEQDVPLIELRQVAQRFGA 371

Query: 352 YQQPGLFNRLL---GRTSPAVVRE----INLNLAAGEVVALVGGSGSGKSTIARAISARL 404
              PG   R L   G + P VV      ++L++  GEVV LVG SG GKST+ R  +  L
Sbjct: 372 TLPPGAVGRALRSVGLSKPPVVTHAVDVVDLSVRPGEVVGLVGESGCGKSTLGRIAAGLL 431

Query: 405 PPRAGIIRLDGTALAPSLKDRSVEELRQIQYIFQNPDASLNPR 447
            P  G + + G  +A       +    +IQ +FQ+P ASLNPR
Sbjct: 432 TPTEGEVIVGGKPVASLSAQEQLAARLRIQMVFQDPYASLNPR 474



 Score =  194 bits (494), Expect = 8e-54
 Identities = 118/305 (38%), Positives = 161/305 (52%), Gaps = 8/305 (2%)

Query: 11  NIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINSLVQTGEVL 70
           ++    P   T+ V  V   + PGE  GLVGESGCGKST+     G  T       GEV+
Sbjct: 384 SVGLSKPPVVTHAVDVVDLSVRPGEVVGLVGESGCGKSTLGRIAAGLLTPTE----GEVI 439

Query: 71  FDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKALPDGMTME 130
             G  +  L A   +  R  RI  V Q+P  SL+P +RV   + E    H  L D    +
Sbjct: 440 VGGKPVASLSAQEQLAAR-LRIQMVFQDPYASLNPRLRVSRIVGEAAMLH-GLTDAAGQD 497

Query: 131 RRIVELFTLVGL-PDVGHRYPHELSGGQQQRVTIAMAVACNPDLLVLDEPTTGLDVTTQR 189
             +       GL P + HRYPH+ SGGQ+QR+ IA A+A  P +LV DE    LDV+ Q 
Sbjct: 498 DYVCAQLERAGLDPALRHRYPHQFSGGQRQRIGIARALAVQPSMLVCDEAVAALDVSIQA 557

Query: 190 QIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDKLLSAPAHPYS 249
           QI+ L  DLR ++G+A L+++HDL ++  + DRV VMY G++VE AP   L + PAHPY+
Sbjct: 558 QILNLFMDLRDQLGLAYLFISHDLGVIEHLCDRVVVMYLGRVVESAPVADLFARPAHPYT 617

Query: 250 RGLIASIPTNDGTDRQARSLRGMLRRD-EMSTGCKFEPRCDFATGACRATPQLLELIEDA 308
           + L+A IP+ D       ++RG +       +GC F PRC  A   CR     L  I   
Sbjct: 618 QALLAEIPSIDARGTTFSAIRGEIPSPIAPPSGCHFHPRCPQAMPRCRTEVPRLRGIAIR 677

Query: 309 RSVAC 313
            + AC
Sbjct: 678 HATAC 682