Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 324 a.a., ABC transporter nucleotide binding/ATPase (oligopeptide) from Agrobacterium fabrum C58

 Score =  219 bits (558), Expect = 1e-61
 Identities = 116/305 (38%), Positives = 178/305 (58%), Gaps = 5/305 (1%)

Query: 1   MKNLIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTI 60
           M  ++E++ L        G   ++ D++  +A GE  GLVGESG GKS     ++G    
Sbjct: 1   MSAMLEIKGLKTEVVTDEGNITLIDDITLSLAAGEVMGLVGESGSGKSVTGLSIMGLLDK 60

Query: 61  NSLVQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATH 120
              +  G++LF G DL       L  +RGNRIA + Q+P ++L+P +R+ +Q+ E++  H
Sbjct: 61  PVQMTGGKILFKGRDLRSASQKELRSIRGNRIAMIFQDPMSTLNPVLRIDTQMMEVVHAH 120

Query: 121 KALPDGMTMERRIVELFTLVGLPDVGHR---YPHELSGGQQQRVTIAMAVACNPDLLVLD 177
           + +   +  ER   +   +VG+P    R   YPH+ SGG +QRV IA+A+  +PD+++ D
Sbjct: 121 ENVSKQVARERAR-DALGMVGIPSPEERLSAYPHQFSGGMRQRVAIAIALLMSPDVIIAD 179

Query: 178 EPTTGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPC 237
           EPTT LDVT Q QI+ ++  L    G A+++VTHDL+++A +A+++ VMYAG++VE    
Sbjct: 180 EPTTALDVTIQAQILSIVQKLAREKGTALIWVTHDLSVVAGLAEKLSVMYAGRIVEQGLT 239

Query: 238 DKLLSAPAHPYSRGLIASIPTNDGTDRQARSLRGMLRR-DEMSTGCKFEPRCDFATGACR 296
             LL  P HPY+ GLIAS+P ++    + R + G       M  GC F PRC FAT  C 
Sbjct: 240 ADLLRRPLHPYTNGLIASLPAHNKRGERLRQISGTTPSVANMPKGCAFHPRCSFATEICL 299

Query: 297 ATPQL 301
            +P L
Sbjct: 300 NSPAL 304



 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 32/83 (38%), Positives = 45/83 (54%), Gaps = 5/83 (6%)

Query: 369 VVREINLNLAAGEVVALVGGSGSGKSTIARAISARLPPRAGIIRLDGTALAPSLKDRSVE 428
           ++ +I L+LAAGEV+ LVG SGSGKS    +I   L     +           L+  S +
Sbjct: 23  LIDDITLSLAAGEVMGLVGESGSGKSVTGLSIMGLLDKPVQMTGGKILFKGRDLRSASQK 82

Query: 429 ELRQIQ-----YIFQNPDASLNP 446
           ELR I+      IFQ+P ++LNP
Sbjct: 83  ELRSIRGNRIAMIFQDPMSTLNP 105