Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 603 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  236 bits (603), Expect = 2e-66
 Identities = 162/451 (35%), Positives = 230/451 (50%), Gaps = 53/451 (11%)

Query: 2   KNLIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTIN 61
           K ++ VRNL  ++     W +VV+DVSF++  GE   +VGESG GKS  +  L+      
Sbjct: 4   KPVLSVRNLTTSFLVDGEWKSVVRDVSFDVKSGETVAIVGESGSGKSVTSLSLMRLLAPA 63

Query: 62  SLVQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHK 121
           S    GEVL +G +LL L    +  +RGN I+ + Q P TSL+P   +G QI E++  HK
Sbjct: 64  SSHIEGEVLLNGRNLLTLSEREMRGVRGNDISMIFQEPMTSLNPIFTIGRQISEVLIRHK 123

Query: 122 ALPDGMTMERRIVELFTLVGLPDVGHR---YPHELSGGQQQRVTIAMAVACNPDLLVLDE 178
            L          V L   V +P+   R   YPH+ SGG +QRV IAMA+A  P LL+ DE
Sbjct: 124 GLSK-QEARAETVRLLEKVRIPNAASRFDEYPHQFSGGMRQRVMIAMALASRPKLLIADE 182

Query: 179 PTTGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCD 238
           PTT LDVT Q QI+ L+  L+   GM++L++THD+ ++A+IADR  VMY G  VE    +
Sbjct: 183 PTTALDVTIQGQILDLIKLLQEEEGMSVLFITHDMGVVAEIADRTIVMYRGDAVETGATE 242

Query: 239 KLLSAPAHPYSRGLIASIP-TNDGTDRQARSLRGMLRRDEMSTGCKFEPRCDFATGACRA 297
            +     HPY+R L++++P      DRQ  +   +L   ++ TG   EP+    T AC  
Sbjct: 243 DIFRRGQHPYTRALLSAVPKLGSMHDRQWPTRFPVL---DLKTGLSTEPQEVAETVACGQ 299

Query: 298 TPQLLELIEDARSVACMRWREATAPLAPSVTAKAVARTAVRSESLLSVTELSLSYQQPGL 357
           TP L                              V R  +RS                GL
Sbjct: 300 TPVL-------------------------SVKNLVTRFPIRS----------------GL 318

Query: 358 FNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIARAISARLPPRAGIIRLDGTA 417
           + R  G      V  ++ +L  GE ++LVG SG GKST  R+I   + P +G + LDG  
Sbjct: 319 WARQTGAVH--AVENVSFDLFQGETLSLVGESGCGKSTTGRSIMRLVEPSSGDVSLDGYD 376

Query: 418 LAPSLKDRSVEELRQ-IQYIFQNPDASLNPR 447
           +   L    +  +R+ +Q IFQ+P +SLNPR
Sbjct: 377 VM-RLDTVGLRNMRKSVQMIFQDPFSSLNPR 406



 Score =  182 bits (461), Expect = 5e-50
 Identities = 98/264 (37%), Positives = 160/264 (60%), Gaps = 10/264 (3%)

Query: 18  SGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINSLVQTGEVLFDGTDLL 77
           +G  + V++VSF++  GE   LVGESGCGKST    ++     +S    G+V  DG D++
Sbjct: 323 TGAVHAVENVSFDLFQGETLSLVGESGCGKSTTGRSIMRLVEPSS----GDVSLDGYDVM 378

Query: 78  KLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKALPDGMTMERRIVELF 137
           +LD   L  +R + +  + Q+P +SL+P M VG+ I E    H+ L      + +  +L 
Sbjct: 379 RLDTVGLRNMRKS-VQMIFQDPFSSLNPRMTVGTAISEPFIKHR-LGSTKQAKEKTADLL 436

Query: 138 TLVGLP-DVGHRYPHELSGGQQQRVTIAMAVACNPDLLVLDEPTTGLDVTTQRQIIQLLA 196
             VGL  D+ +RYPHE SGGQ+QR+ IA A+A +P ++V DE  + LDV+ + Q+  LL 
Sbjct: 437 EKVGLSADMANRYPHEFSGGQRQRIAIARALALDPKVIVADESVSALDVSIKAQVCNLLL 496

Query: 197 DLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDKLLSAPAHPYSRGLIASI 256
           DL+  + +A L+++HD+A++ +++ RV VMY G++VE+ P   +   P HPY++ L+A++
Sbjct: 497 DLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVFDNPQHPYTKKLMAAV 556

Query: 257 PTNDGTDRQARSLRGMLRRDEMST 280
           P     D   R +R  +  DE+ +
Sbjct: 557 PV---PDPARRGMRRGISNDELKS 577



 Score = 53.5 bits (127), Expect = 2e-11
 Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 15/116 (12%)

Query: 337 VRSESLLSVTELSLSYQQPGLFNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTI 396
           + ++ +LSV  L+ S+   G +         +VVR+++ ++ +GE VA+VG SGSGKS  
Sbjct: 1   METKPVLSVRNLTTSFLVDGEWK--------SVVRDVSFDVKSGETVAIVGESGSGKSVT 52

Query: 397 ARAISARLPPRA----GIIRLDGTALAPSLKDRSVEELR--QIQYIFQNPDASLNP 446
           + ++   L P +    G + L+G  L  +L +R +  +R   I  IFQ P  SLNP
Sbjct: 53  SLSLMRLLAPASSHIEGEVLLNGRNLL-TLSEREMRGVRGNDISMIFQEPMTSLNP 107