Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 324 a.a., oligopeptide ABC transporter ATPase from Agrobacterium fabrum C58

 Score =  222 bits (566), Expect = 2e-62
 Identities = 123/305 (40%), Positives = 177/305 (58%), Gaps = 6/305 (1%)

Query: 2   KNLIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTIN 61
           +++I+VRNL + + G  G    + D+S  I PGE  G+VGESG GKS     + G     
Sbjct: 3   QSVIDVRNLKVEFPGRRGTVTALSDISLSIRPGEILGVVGESGAGKSMTGLAIQGLLEKP 62

Query: 62  SLVQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHK 121
             +  GE+      + +LD  ++  +RG  I  + Q+P TSL+P   VG+Q+ E I  H 
Sbjct: 63  GRIADGEIWLGSRRIDQLDDRAMESIRGREIGAIFQDPLTSLNPLFTVGAQLVETIRQHL 122

Query: 122 ALPDGMTMERRIVELFTLVGLPDVGHR---YPHELSGGQQQRVTIAMAVACNPDLLVLDE 178
            L        R ++L   VG+P    R   YPH+ SGG +QRV IA+A++ +P L++ DE
Sbjct: 123 PLSKA-DARARAIQLLRDVGIPSPADRIDHYPHQFSGGMRQRVVIALALSASPKLIIADE 181

Query: 179 PTTGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCD 238
           PTT LDV+ Q QII LL  L      A++ VTHD+ ++A+ ADRV V+YAG+L+EV P +
Sbjct: 182 PTTALDVSIQAQIISLLRRLCKEKQTAVMLVTHDMGVIAEAADRVAVLYAGRLIEVGPVE 241

Query: 239 KLLSAPAHPYSRGLIASIPTNDGTDRQARSLRG-MLRRDEMSTGCKFEPRCDFATGAC-R 296
           ++L  P HPY++GL+ASIP+      +   + G M R D +  GC F PRC FA   C R
Sbjct: 242 QVLHEPRHPYTQGLMASIPSLGARVERLNQIDGAMPRLDAIPPGCAFNPRCSFAGPRCLR 301

Query: 297 ATPQL 301
             P+L
Sbjct: 302 QRPEL 306



 Score = 47.0 bits (110), Expect = 1e-09
 Identities = 40/114 (35%), Positives = 62/114 (54%), Gaps = 15/114 (13%)

Query: 339 SESLLSVTELSLSYQQPGLFNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIAR 398
           ++S++ V  L + +  PG       R +   + +I+L++  GE++ +VG SG+GKS    
Sbjct: 2   NQSVIDVRNLKVEF--PGR------RGTVTALSDISLSIRPGEILGVVGESGAGKSMTGL 53

Query: 399 AISARL--PPRA--GIIRLDGTALAPSLKDRSVEEL--RQIQYIFQNPDASLNP 446
           AI   L  P R   G I L G+     L DR++E +  R+I  IFQ+P  SLNP
Sbjct: 54  AIQGLLEKPGRIADGEIWL-GSRRIDQLDDRAMESIRGREIGAIFQDPLTSLNP 106