Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 606 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  258 bits (659), Expect = 5e-73
 Identities = 160/450 (35%), Positives = 243/450 (54%), Gaps = 56/450 (12%)

Query: 4   LIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTI-NS 62
           L+ V  L++ +G     + VV D+SF + PG    +VGESG GKS  +   +    +  +
Sbjct: 9   LLSVEGLSVEFGD----SRVVDDISFRVEPGRTVAVVGESGSGKSVTSLSTMRLADMMGA 64

Query: 63  LVQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKA 122
              TG++LF+G DLLK     +  +RG  IA + Q P TSL+P   +G QICE++  H+ 
Sbjct: 65  TYPTGKILFEGKDLLKASQKEMRSIRGKEIAMIFQEPMTSLNPVFTIGDQICEVLVLHEK 124

Query: 123 LPDGMTMERRIVELFTLVGLPDVG---HRYPHELSGGQQQRVTIAMAVACNPDLLVLDEP 179
           L     ME+   +L  +V LPD     HRYPH+LSGG +QRV IAMA+AC P LL+ DEP
Sbjct: 125 LGKTAAMEQA-KQLLDMVRLPDAAELLHRYPHQLSGGMRQRVMIAMALACRPKLLIADEP 183

Query: 180 TTGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDK 239
           TT LDVT Q QI+ ++ DL+ ++GM M+++THD+ ++A++AD V VM+ G+ VE  P   
Sbjct: 184 TTALDVTIQAQILNIMRDLQKKLGMGMVFITHDMGVVAEMADDVVVMWKGKKVEEGPVKD 243

Query: 240 LLSAPAHPYSRGLIASIPTNDGTDRQARSLRGMLRRDEMSTGCKFEPRCDFATGACRATP 299
           + + P HPY+R L++++P     + +A                 F  R            
Sbjct: 244 IFANPQHPYTRALLSAVPRLGSMEGEA-----------------FPKRLP---------- 276

Query: 300 QLLELIEDARSVACMRWREATAPLAPSVTAKAVARTAVRSES-LLSVTELSLSYQ-QPGL 357
             L +++D + V               +  + V  TA   +  LLSV +L + +  +  L
Sbjct: 277 --LTVLQDGQPVV--------------IGEERVQDTAKYDQKPLLSVKDLFVRFDIRKNL 320

Query: 358 FNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIARAISARLPPRAGIIRLDGTA 417
           F +   R S   V++++ ++ AGE +ALVG SGSGKSTI R I       +G I  +G +
Sbjct: 321 FGKATHRLS--AVQKVSFDIHAGETLALVGESGSGKSTIGRTIQQLQTAVSGEIAFNGRS 378

Query: 418 LAPSLKDRSVEELRQIQYIFQNPDASLNPR 447
            +           +++QYIFQ+P ASL+PR
Sbjct: 379 YSQMSAAERFRMRQEVQYIFQDPFASLDPR 408



 Score =  181 bits (459), Expect = 8e-50
 Identities = 106/279 (37%), Positives = 162/279 (58%), Gaps = 14/279 (5%)

Query: 2   KNLIEVRNLNIAY-------GGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRL 54
           K L+ V++L + +       G  +   + VQ VSF+I  GE   LVGESG GKST+   +
Sbjct: 302 KPLLSVKDLFVRFDIRKNLFGKATHRLSAVQKVSFDIHAGETLALVGESGSGKSTIGRTI 361

Query: 55  LGYGTINSLVQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQIC 114
               T  S    GE+ F+G    ++ AA   R+R   + ++ Q+P  SL P   VG  I 
Sbjct: 362 QQLQTAVS----GEIAFNGRSYSQMSAAERFRMR-QEVQYIFQDPFASLDPRKTVGFSIA 416

Query: 115 EMIATHKALPDGMTMERRIVELFTLVGLP-DVGHRYPHELSGGQQQRVTIAMAVACNPDL 173
           E I TH  + D   + RR+ EL   VGL  +   RYPHE SGGQ+QRV IA A+A +P L
Sbjct: 417 EPINTHGLINDQKAVRRRVDELLERVGLSSEHAARYPHEFSGGQRQRVCIARALASDPKL 476

Query: 174 LVLDEPTTGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVE 233
           ++ DE  + LDV+ Q QII L  DL++  G+A L+++HD+A++ +++ RV V+Y GQ++E
Sbjct: 477 IIADEALSALDVSIQAQIINLFMDLQAERGLAYLFISHDMAVVEKMSHRVAVLYLGQIME 536

Query: 234 VAPCDKLLSAPAHPYSRGLIASIPTNDGT-DRQARSLRG 271
           +    ++   P H Y+R L++++P  D T +R+   + G
Sbjct: 537 LGSRQQVFETPTHDYTRRLLSAVPVADPTIERRIAMIEG 575



 Score = 41.2 bits (95), Expect = 1e-07
 Identities = 39/119 (32%), Positives = 53/119 (44%), Gaps = 22/119 (18%)

Query: 336 AVRSESLLSVTELSLSYQQPGLFNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKST 395
           A  + +LLSV  LS+ +                VV +I+  +  G  VA+VG SGSGKS 
Sbjct: 3   AANANALLSVEGLSVEFGDS------------RVVDDISFRVEPGRTVAVVGESGSGKSV 50

Query: 396 -------IARAISARLPPRAGIIRLDG-TALAPSLKDRSVEELRQIQYIFQNPDASLNP 446
                  +A  + A  P   G I  +G   L  S K+      ++I  IFQ P  SLNP
Sbjct: 51  TSLSTMRLADMMGATYP--TGKILFEGKDLLKASQKEMRSIRGKEIAMIFQEPMTSLNP 107