Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 616 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  236 bits (601), Expect = 3e-66
 Identities = 146/448 (32%), Positives = 231/448 (51%), Gaps = 51/448 (11%)

Query: 4   LIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINSL 63
           ++ V+NL  ++    GW +VV+++SF+IAP E   +VGESG GKS  +  ++      + 
Sbjct: 18  VLSVQNLTTSFRVDGGWKSVVRNMSFDIAPRETVAIVGESGSGKSVTSLSIMRLLDRKTS 77

Query: 64  VQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKAL 123
              G+V+  G DLL L    + ++RG  I+ + Q P TSL+P   +G QI E +  H+ +
Sbjct: 78  RIEGKVMLGGRDLLALPEEEMRKVRGKDISMIFQEPMTSLNPIFPIGKQIAEALTVHQDI 137

Query: 124 PDGMTMERRIVELFTLVGLPDVGHR---YPHELSGGQQQRVTIAMAVACNPDLLVLDEPT 180
                 +  ++ L   V +P+   R   YPH+ SGG +QRV IAMA+A  P LL+ DEPT
Sbjct: 138 SSSAA-KAEVIRLLEKVRIPNAASRFGDYPHQFSGGMRQRVMIAMALASKPKLLIADEPT 196

Query: 181 TGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDKL 240
           T LDVT Q QI+ L+  L+   GM++L++THD+ ++A++ADR  VM+ G +VE    D +
Sbjct: 197 TALDVTIQGQILDLIKQLQEEEGMSVLFITHDMGVVAEVADRTIVMFRGDVVETGTTDDI 256

Query: 241 LSAPAHPYSRGLIASIPTNDGTDRQARSLRGMLRRDEMSTGCKFEPRCDFATGACRATPQ 300
                HPY+R L++++P       +  S+R  L            P  D  TG      +
Sbjct: 257 FHRGQHPYTRALLSAVP-------KLGSMRSRLLPARF-------PIIDIKTGESPPVVE 302

Query: 301 LLELIEDARSVACMRWREATAPLAPSVTAKAVARTAVRSESLLSVTELSLSYQ-QPGLFN 359
             + +   ++                               +LSV +L+  +  + GLF 
Sbjct: 303 TKDTVSGGKT------------------------------PILSVKDLTTRFDIRSGLFG 332

Query: 360 RLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIARAISARLPPRAGIIRLDGTALA 419
           R  G      V +++ +LA GE ++LVG SG GKST  R+I+  + P +G + LDG  + 
Sbjct: 333 RKSGAVH--AVEKVSFDLAEGETLSLVGESGCGKSTTGRSITRLIEPTSGNVTLDGYEVL 390

Query: 420 PSLKDRSVEELRQIQYIFQNPDASLNPR 447
              +       R +Q +FQ+P ASL+PR
Sbjct: 391 KLDRTTLRTMRRSVQMVFQDPFASLDPR 418



 Score =  183 bits (465), Expect = 2e-50
 Identities = 100/257 (38%), Positives = 155/257 (60%), Gaps = 11/257 (4%)

Query: 14  YGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINSLVQ--TGEVLF 71
           +G  SG  + V+ VSF++A GE   LVGESGCGKST         +I  L++  +G V  
Sbjct: 331 FGRKSGAVHAVEKVSFDLAEGETLSLVGESGCGKSTTGR------SITRLIEPTSGNVTL 384

Query: 72  DGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKALPDGMTMER 131
           DG ++LKLD  +L  +R + +  V Q+P  SL P M VG+ I E    H+        E+
Sbjct: 385 DGYEVLKLDRTTLRTMRRS-VQMVFQDPFASLDPRMSVGTAIMEPFMEHRLGQKAQAREK 443

Query: 132 RIVELFTLVGL-PDVGHRYPHELSGGQQQRVTIAMAVACNPDLLVLDEPTTGLDVTTQRQ 190
              +L   VGL PD+  R+PHE SGGQ+QR+ IA ++  +P ++V DE  + LDV+ + Q
Sbjct: 444 A-ADLLEKVGLSPDMMKRFPHEFSGGQRQRIAIARSLMLDPKVIVADEAVSALDVSIKAQ 502

Query: 191 IIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDKLLSAPAHPYSR 250
           +  LL DL+  + +A L+++HD+A++ +++ RV VMY G++VE+ P   +   P HPY++
Sbjct: 503 VCNLLLDLQQSLNLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRAAVFDNPQHPYTK 562

Query: 251 GLIASIPTNDGTDRQAR 267
            L++++P  D   RQ R
Sbjct: 563 KLMSAVPVPDPARRQIR 579



 Score = 48.9 bits (115), Expect = 6e-10
 Identities = 40/126 (31%), Positives = 64/126 (50%), Gaps = 15/126 (11%)

Query: 327 VTAKAVARTAVRSESLLSVTELSLSYQQPGLFNRLLGRTSPAVVREINLNLAAGEVVALV 386
           + A ++ +T      +LSV  L+ S++  G +         +VVR ++ ++A  E VA+V
Sbjct: 3   LAATSMEQTGGSVSPVLSVQNLTTSFRVDGGWK--------SVVRNMSFDIAPRETVAIV 54

Query: 387 GGSGSGKS----TIARAISARLPPRAGIIRLDGTALAPSLKDRSVEELR--QIQYIFQNP 440
           G SGSGKS    +I R +  +     G + L G  L  +L +  + ++R   I  IFQ P
Sbjct: 55  GESGSGKSVTSLSIMRLLDRKTSRIEGKVMLGGRDLL-ALPEEEMRKVRGKDISMIFQEP 113

Query: 441 DASLNP 446
             SLNP
Sbjct: 114 MTSLNP 119