Pairwise Alignments

Query, 604 a.a., ABC transporter ATP-binding protein from Sinorhizobium meliloti 1021

Subject, 611 a.a., ABC transporter permease from Agrobacterium fabrum C58

 Score =  254 bits (649), Expect = 7e-72
 Identities = 160/447 (35%), Positives = 228/447 (51%), Gaps = 49/447 (10%)

Query: 4   LIEVRNLNIAYGGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINSL 63
           ++ VRNL  ++    GW  VV+D+SF++ PGE   +VGESG GKS  +  ++      S 
Sbjct: 15  VLSVRNLTTSFHVDGGWKPVVRDISFDVGPGETVAIVGESGSGKSVTSLSIMRLLDRESS 74

Query: 64  VQTGEVLFDGTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKAL 123
              GE+L  G +LL L   ++ R+RGN +A + Q P TSL+P   +G QI E +  H+ +
Sbjct: 75  RVQGEILLGGRNLLSLSEDAMRRVRGNEVAMIFQEPMTSLNPLFTIGDQISEALLCHQPM 134

Query: 124 PDGMTMERRIVELFTLVGLPDVGHR---YPHELSGGQQQRVTIAMAVACNPDLLVLDEPT 180
                     V L   V +P    R   YPH  SGG +QRV IAMA+A  P LL+ DEPT
Sbjct: 135 SKAEA-RAETVRLLEKVRIPSAASRFDEYPHRFSGGMRQRVMIAMALASKPKLLIADEPT 193

Query: 181 TGLDVTTQRQIIQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDKL 240
           T LDVT Q QI+ L+  L+   G ++L++THD+ ++A+IADR  VMY G+ VEV     +
Sbjct: 194 TALDVTIQGQILDLIKTLQEEEGTSVLFITHDMGVVAEIADRTVVMYRGEQVEVGATADI 253

Query: 241 LSAPAHPYSRGLIASIPTNDGTDRQARSLRGMLRRDEMSTGCKFEPRCDFATGACRATPQ 300
                HPY+R L++++P       + R LR               P  + ATG       
Sbjct: 254 FHRGKHPYTRALLSAVPVLGSMKGEERPLR--------------FPIVNTATG------- 292

Query: 301 LLELIEDARSVACMRWREATAPLAPSVTAKAVARTAVRSESLLSVTELSLSYQQPGLFNR 360
                            E   P+ P+ T  A A+  ++ E L    ++       GL  R
Sbjct: 293 -----------------ETQEPVRPADTVDASAQPVLKVEGLTKRFDI-----HSGLLGR 330

Query: 361 LLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIARAISARLPPRAGIIRLDGTALAP 420
           L GR     V  ++ +L AGE ++LVG SG GKST  RAI   + P AG + ++G  +  
Sbjct: 331 LSGRVH--AVENVSFDLRAGETLSLVGESGCGKSTTGRAIMRLIEPDAGSVVVNGENILT 388

Query: 421 SLKDRSVEELRQIQYIFQNPDASLNPR 447
             K    E  + +Q IFQ+P ASLNPR
Sbjct: 389 LDKSGMREMRKTVQMIFQDPFASLNPR 415



 Score =  178 bits (451), Expect = 7e-49
 Identities = 95/256 (37%), Positives = 153/256 (59%), Gaps = 11/256 (4%)

Query: 15  GGPSGWTNVVQDVSFEIAPGEAFGLVGESGCGKSTVAYRLLGYGTINSLVQ--TGEVLFD 72
           G  SG  + V++VSF++  GE   LVGESGCGKST    ++       L++   G V+ +
Sbjct: 329 GRLSGRVHAVENVSFDLRAGETLSLVGESGCGKSTTGRAIM------RLIEPDAGSVVVN 382

Query: 73  GTDLLKLDAASLMRLRGNRIAFVPQNPTTSLSPGMRVGSQICEMIATHKALPDGMTMERR 132
           G ++L LD + +  +R   +  + Q+P  SL+P M VG+ I E    H+ +      +  
Sbjct: 383 GENILTLDKSGMREMR-KTVQMIFQDPFASLNPRMTVGAAIAEPFLEHR-MGSAREAKEV 440

Query: 133 IVELFTLVGL-PDVGHRYPHELSGGQQQRVTIAMAVACNPDLLVLDEPTTGLDVTTQRQI 191
           + ++   VGL PD+  RYPHE SGGQ+QR+ IA A+A  P ++V DE  + LDV+ + Q+
Sbjct: 441 VADMLNKVGLSPDMAARYPHEFSGGQRQRICIARALALQPKVIVADESVSALDVSIKAQV 500

Query: 192 IQLLADLRSRIGMAMLYVTHDLALLAQIADRVGVMYAGQLVEVAPCDKLLSAPAHPYSRG 251
           I L+ DL+  + +A L+++HD+A++ +++ RV VMY G++VE+ P   +   P H Y+R 
Sbjct: 501 INLMLDLQQSLDLAFLFISHDMAVVERVSHRVAVMYLGEIVEIGPRADVFDNPQHDYTRK 560

Query: 252 LIASIPTNDGTDRQAR 267
           L+A++P  D   R  R
Sbjct: 561 LMAAVPVPDPDRRNTR 576



 Score = 50.4 bits (119), Expect = 2e-10
 Identities = 40/113 (35%), Positives = 60/113 (53%), Gaps = 15/113 (13%)

Query: 340 ESLLSVTELSLSYQQPGLFNRLLGRTSPAVVREINLNLAAGEVVALVGGSGSGKSTIARA 399
           +++LSV  L+ S+   G +          VVR+I+ ++  GE VA+VG SGSGKS  + +
Sbjct: 13  DAVLSVRNLTTSFHVDGGWK--------PVVRDISFDVGPGETVAIVGESGSGKSVTSLS 64

Query: 400 ISARLPPRA----GIIRLDGTALAPSLKDRSVEELR--QIQYIFQNPDASLNP 446
           I   L   +    G I L G  L  SL + ++  +R  ++  IFQ P  SLNP
Sbjct: 65  IMRLLDRESSRVQGEILLGGRNLL-SLSEDAMRRVRGNEVAMIFQEPMTSLNP 116